Neodiprion pinetum (white pine sawfly): 124219114
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Entry
124219114 CDS
T08966
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
Organism
npt
Neodiprion pinetum (white pine sawfly)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_3
RTT107_BRCT_5
Prok-RING_4
zf-RING_4
DUF547
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124219114
NCBI-ProteinID:
XP_046482242
LinkDB
All DBs
Position
5:complement(4549016..4571001)
Genome browser
AA seq
1741 aa
AA seq
DB search
MNEFEVDTEVKRIAEAIASSRETLQCTFCRQLPTEAVSGKCGHPICKNCASKICGTRKAI
CPICKTILTRSSIRRVKTIDDAVKCLKRLIDAFETDSRTNFLSFNLIPTKQDKDPKPSTS
GIVEHHFVTNQPQRSRKSSAADGIRRRATIDSGETLKITRRNSLHRNEDLTSMSNESNTT
LGKGHASMVHGLLAKSEPLEPNEKVGLWLDSEEFDEQLVVVGEIEKPVITLVPSIATTEV
PDSASIVRPNSRMSLQSGRKTTSLTKKNRASSTPKKKRNGITSNTTPEENMFDELCGKRV
SEQPTETRKVKIASSSADSSWCKLEQFEQETSAKVRKRKRLNISIEKPSTSKQVVGTLDL
ECSEDDDKIEDAKSGENLINSNNVQGKNKPHIISDRKLETEEILYLRKLNKRQVKEIIGV
SCTQADFDTSKNSSFSPDKSPTKLRNNQTSLRKSDNSNHNNSNDSLPLQIEPEKDTTSCI
ESIVRPKSRLSLSLSGSRPSSRLSHKSPSESTVRILQQRTDEKSPILGTSSVRVSFHQND
EETKEGTQRNQSNSSTGKDPSIRSCSGFMKRNLVLKRLSSESGKHNVSMLKRGKLYRSRS
NVKFLRLGSIISRTLRNELQNIFCSGKVSTCDVETQTNSRLTQTNHMVCSVCKKHVSSEA
LDNVIIPETRTVSSVSSKSKATQIKEVGTSDPATQRALVEEEFDTVNKVNMMSPKEDSQL
KYLSTESPTVDNTERSVKKRRRSPDLQEYAQAIENYANKLIVTDSEDQDTPCQEKFLSSK
EINDQTREKNFSSLGTTFSTKTSLLSKITDNPNCLLNLSKSRSPSSRSDTKSLHTSPKRR
IRASDSFASESKRQSMEKRKLQIKMSGSYCNTSSDSDGETIRVKKATPISMRKCSGGSKS
PMANAKYKVVRKLKYSQESGSNPGTNLRTSQPLEQQGTHEKENRAEEPSTKKTFKRIRQM
SSSELQDDYLETEVTSKTSGSNSSLIGTRPIVSWEVNKSPLPSEELSVVFSSNKETQDSK
RKRSPSPSSIDIHAIASNWCADLNLSSEEFDNKNDSVLGVFSSKATKKKKLQIDNSPVSS
SSDSLPILDQTAFYGKPRKGTDSISKSENHDVTDRVVNEKNTITRDCGDEVEEAIEVNKG
SLNNSQSSAKDITSDKDKRNRSNCDLEDARIPSERNENSCGENAISAMSNISVEKNEIAE
NMDSLLQLGDKLNGVITPRGNSTPIKNKSFQNRNPVTFHRHSYNSNKENEAERESENEED
KGKEGTLLRDSSKLTNRTTHEASKVKNIRISNERNDTVESARVDGDVESCQSSFDHDCMN
ITQDHMMLQEVENNLLRPKSIKEKEKNSRNNVQKSVDEIATKISPQKKSLVAMDNQKVKA
CTETHSDDSETMGEDIIERTPEKTKALKKDLHDHIENSQRSTVSRRSFMSVDITPIQRKF
QKFMHTATNVSPLVERAGKSSADQHGAAKIARLSFHSTPKSVDPKKSLFARPVLTKPRGA
SESRLCFVCSNLTLPQIENVKAFARLHNADYTVNYKPEVTHVIVKTEEDDSAARTMKYLL
GIAHKKWIVSYQWVTDSSSQNRLLEEEDYEVVDSDTHEPGPRRSRLSKTGLFDEFAFTCM
AATSEIPVSNLQDLVGSSGGTVFQTLEDLATERNKYKVILYDTDTQQPTVLDKWRQKSRA
LPVPLEWVLTCISQYELVSLYSYLPPFTPEVAANLGFPQELLVEDEEDSLSPNETSASNA
A
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatttgaggtggataccgaagtgaagagaatcgcagaagcgattgcatctagt
cgagaaactcttcagtgcacattctgtcgtcaactgccaactgaggctgtcagcggaaaa
tgcggtcatccaatttgcaaaaattgtgcgagtaagatatgtggaacgagaaaagcgatc
tgccctatctgcaagactatcttaacaagaagcagtatacgcagagtaaagactattgac
gacgctgtgaagtgtctgaaaagactcattgatgcatttgagacagattcgaggactaat
tttttgtcctttaacctaattccaacaaagcaggataaggatccgaagccttcgaccagt
ggaattgttgaacatcactttgtcacaaatcaacctcagagatctcgtaaaagttcagcg
gcagatgggataagaagacgagcgaccatcgattctggggaaactcttaagataacaagg
agaaactccttacatagaaatgaagatctgacgagtatgtcaaacgagagtaatactact
ttgggaaaagggcatgcctccatggtccatggtctcttagctaaatctgaacctctcgaa
ccgaacgaaaaggttggtctttggttagattcggaggaatttgatgaacagcttgtggtt
gtcggagaaatagaaaaaccagttatcactctggtcccatctattgcaacaactgaggtc
ccagactcagcgtccatagtacgtcccaattcgcgcatgtcactacagagcggtagaaaa
actacatccctaactaaaaagaatcgagcctcgtcgactccaaagaagaaaagaaatggg
attacttctaacaccactcccgaggaaaacatgtttgatgagttgtgcgggaagagagta
tctgagcaaccaacggaaactaggaaagtcaaaattgcctcaagttcggcggatagttca
tggtgtaaattagagcaatttgaacaggaaacaagcgccaaggtcagaaaacgcaaacga
ttgaacatcagtatagaaaaaccaagtacatcgaagcaagttgttggcacattggattta
gaatgttctgaagatgatgataaaatcgaggatgctaaaagtggtgaaaatctgatcaat
agcaacaatgtacaaggcaagaataagccacacatcatatctgacagaaagctggagact
gaggaaattttgtatctccgaaaattaaacaaacgccaagtaaaagagataattggcgtt
agttgtacgcaggcagactttgatacatccaaaaattccagttttagtccagacaaatct
ccgactaaattgcgtaataatcaaacgtcgctgagaaaatctgataacagtaaccacaac
aacagcaacgattcgttgccgctgcagattgaacctgaaaaagatacaacgtcgtgtatc
gaatcaatcgtgagaccgaaatccaggctaagtctttctctttctggcagtcgtccgagt
tctagactttcgcataaaagtcccagtgaatccacagtgaggatattacaacagagaacc
gatgagaaatctccaattcttggcacgagttctgtcagagtttcatttcaccaaaacgac
gaagaaacaaaggaaggaactcagcgaaaccaaagtaattcttctacgggaaaggatcct
tccataagatcgtgcagcggtttcatgaaaagaaatcttgtgttgaaaagattatcttcc
gaaagcggtaagcataatgtgagcatgctgaagagaggtaaactttacaggtctcgaagt
aacgtcaaatttctacgccttggttcgattatatcgcgaactttgcgaaacgaattacag
aatattttttgttctggaaaagtgtcgacgtgcgacgtggagacccagacgaattctaga
ctgactcaaacaaatcatatggtatgcagtgtttgtaaaaaacatgttagcagcgaggca
ttggacaatgtgataattcctgaaacacggaccgtctccagtgtctcgagtaaatcaaaa
gcaacgcaaattaaggaagtcggtacaagtgatcctgcaacgcaacgcgcattggtagaa
gaagaattcgacactgtgaacaaggtgaatatgatgtctccaaaagaagattcacagctc
aagtatttgtcaacggagtctcctacggttgacaatactgaacgttctgttaaaaaaaga
cgcagatctcctgatctccaagaatatgctcaagcgatcgaaaattatgcaaataaattg
atagtaactgattcggaagaccaagataccccgtgccaagaaaaatttcttagcagtaaa
gaaataaatgatcagacacgggaaaaaaatttttctagcttaggaactacattttctaca
aaaacttctttgctttcgaagattaccgataatcctaattgtttattaaatttaagtaag
tcaagatctccctcgtcacgttcagatactaaatcattacacacgtcgccgaaaagaaga
atacgggcatcggattctttcgcaagtgaatctaagagacaaagtatggagaaacggaaa
ttacagattaaaatgagcggaagttactgcaatacttcttctgattctgacggtgaaaca
attcgagtaaaaaaggcaacgccaataagtatgagaaagtgttcgggaggtagcaaatcc
ccgatggcaaatgccaaatacaaagttgtaagaaaattgaagtacagtcaagaatctggc
tcaaatcctggcactaatttgagaaccagtcaaccgctggaacaacaaggaacacatgag
aaggaaaacagagctgaagaaccatctacgaaaaaaacattcaaaagaatacgtcaaatg
tccagttcagaattacaagatgattatttggaaacagaagtaacatcaaaaaccagcggg
tctaacagctctctaattggtactaggccaattgtttcttgggaagtcaataaaagccca
ctgccgagtgaagaacttagcgtcgttttctcatccaacaaggaaacgcaagattctaaa
cgcaagagatctccttccccaagctccatcgacattcatgcgatagcaagtaactggtgc
gcagacctgaatctttcgtcggaagaatttgacaataaaaatgactcagttttgggagta
tttagcagcaaagctacaaagaaaaaaaaattacagattgataactcgcctgtatcgtcg
agcagtgacagtctaccgatattggaccaaactgcgttttatgggaagcccaggaaaggc
acagattcaatatcaaagtcagagaaccatgatgtgacagatcgagtcgtcaatgagaaa
aatacaatcactcgtgactgtggtgatgaagttgaagaagctatcgaagtgaacaaagga
tctctaaacaatagtcaaagtagcgctaaagatatcacatcagataaagacaagagaaac
aggtcaaattgtgatcttgaagatgccagaattccgtctgaaagaaatgaaaattcttgt
ggtgaaaatgctatttctgccatgtcaaatatttcggtggaaaaaaatgaaattgccgaa
aatatggacagtttgcttcaactcggcgataaattgaatggagtgattacaccaagagga
aattcaacgccgataaagaacaaatcattccaaaatagaaaccctgtaacatttcatcga
cattcgtataattcaaataaagaaaatgaggcggaaagagagtcagagaatgaggaggat
aagggaaaggaaggtactttactcagagactcgagtaaattaacaaaccgcacaactcat
gaagcatcaaaggtgaaaaatataaggatatcaaacgaaagaaatgatacggttgaaagt
gctagggtagatggtgacgtagaatcctgtcaatcgtccttcgatcacgactgtatgaac
ataacgcaagatcacatgatgctccaagaagtcgaaaacaacttactgaggccaaaatct
atcaaggagaaagaaaagaacagtcgaaacaatgtgcaaaaaagtgttgatgaaatagcg
acaaaaatttcgcctcaaaaaaaatcattggtagctatggacaatcaaaaggtcaaagct
tgtactgagacacactctgacgactcggaaactatgggtgaggacataatagaacgtaca
ccggaaaagactaaggcgttaaaaaaggaccttcacgaccacattgaaaattcgcaacgg
tcgactgtgtcgagaagaagcttcatgtcggtggacataacaccgatacagagaaagttt
caaaaatttatgcataccgctaccaacgtttctcctttagttgaaagagctggcaaatca
tcagctgaccaacacggcgctgccaaaattgcacggctctcgtttcacagtactcctaaa
tcagttgatccaaaaaaaagtctttttgcgcgacccgtcttgacaaaacctaggggcgcg
agcgagagcagattatgctttgtctgcagcaacttgacacttcctcaaattgagaatgtg
aaggcatttgcccgtttgcacaacgcggattataccgtgaactacaaacctgaagtaacc
cacgtaattgtaaaaactgaagaagatgattccgcagcgaggacaatgaaatatctcctt
ggtattgctcacaagaaatggatagtcagttatcagtgggtaacggactcttcgagtcag
aacaggctcctcgaagaggaagattacgaagtggtggacagtgacacgcatgagcctgga
ccacgccgatcgaggttgagtaaaacaggcttgttcgacgagtttgccttcacttgcatg
gcggctacctcagaaattccagtcagcaaccttcaggatcttgtaggtagctcgggcggt
acggtgttccaaactttggaagaccttgccactgaaaggaacaagtacaaagttattttg
tacgacactgatactcaacagcccacagtcttagataaatggcggcagaagagtcgagca
ttgccagtgccgctcgaatgggttctgacttgtataagtcagtacgagctggtgtctctc
tactcttacctgcctcccttcacgcctgaggtagcggcgaacttaggatttccacaagag
ctacttgtcgaagacgaagaggacagcctcagtccaaatgaaacgtcggcatcgaacgct
gcctaa
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