Neodiprion pinetum (white pine sawfly): 124219130
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Entry
124219130 CDS
T08966
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124219130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124219130
Spliceosome [BR:
npt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124219130
Complex C
U4/U6.U5 tri-SnRNP related factors
124219130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
124219130
NCBI-ProteinID:
XP_046482270
EnsemblRapid:
LOC124219130
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All DBs
Position
1:35670239..35672802
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AA seq
298 aa
AA seq
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MANRTVKDAKSIRGTNPQYLVEKIIRSRIYDSKYWKEECFALTAELLVDKAMELKYIGGV
FGGNVKPTPFLCLILKMLQIQPEKDIIVEFIKNEEFKYVRALGALYMRLTGTSVDCYKYL
EPLFNDNRKLRRQNKQGQYELIHMDEFIDELLREERSCDVILPRIQKRHVLEENNEIEGK
ISALEDDMDEGIESSDDEDVPVVKEEVRKRTEDFERERHRDREKRHARPEKKVEREKRRS
RSRERERDRRERKRSKSPKLYSSSSHKDKDRDKDRHRRDDREKERDRDRRRERERPRH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggtaaaagacgcgaagtctattcgcggtacaaatccacaatattta
gtagaaaaaataatcagatcacgaatatacgattcgaaatattggaaagaagaatgtttt
gcgttaaccgccgaacttttggtcgacaaagcgatggagttgaaatatatcgggggagtg
tttggcggcaatgtaaagccaacgccattcctctgtttgattctgaaaatgcttcaaatc
caaccagaaaaggatatcatagtcgaattcatcaaaaatgaagaatttaagtatgtacgt
gccttaggagctttgtacatgcgactaactggcacctctgttgattgctacaaatatttg
gaacctttattcaacgacaatagaaaattgagacgacagaataagcagggtcaatatgaa
ttgatccatatggacgaattcattgatgagctactcagagaggaaagatcgtgcgatgtt
attttgcccagaatacagaagcgccatgttctagaagaaaataatgaaatagagggaaaa
atatccgcactcgaggacgacatggatgagggaattgagtcttcagatgacgaagatgtg
cccgtagtaaaggaggaagttcgtaaacgtacagaagactttgaaagagagcgtcacagg
gatcgagaaaagagacatgctcgccccgagaaaaaagtagaaagggaaaaacggcggtcc
agaagtagggagcgggaaagagacaggagggaacgtaaacgaagcaaatctcctaaactg
tattcctcatcgtcacacaaagataaagatcgtgataaggataggcacagaagggacgac
agggagaaagaaagagatcgagatcgtcggagagaacgagagcggcctaggcactaa
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