Neodiprion pinetum (white pine sawfly): 124219139
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Entry
124219139 CDS
T08966
Symbol
RpA-70
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03420
Nucleotide excision repair
npt03430
Mismatch repair
npt03440
Homologous recombination
npt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124219139 (RpA-70)
03420 Nucleotide excision repair
124219139 (RpA-70)
03430 Mismatch repair
124219139 (RpA-70)
03440 Homologous recombination
124219139 (RpA-70)
03460 Fanconi anemia pathway
124219139 (RpA-70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npt03000
]
124219139 (RpA-70)
03032 DNA replication proteins [BR:
npt03032
]
124219139 (RpA-70)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124219139 (RpA-70)
Transcription factors [BR:
npt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124219139 (RpA-70)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124219139 (RpA-70)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124219139 (RpA-70)
MMR (mismatch excision repair)
124219139 (RpA-70)
DSBR (double strand breaks repair)
HR (homologous recombination)
124219139 (RpA-70)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
T2SSC
Motif
Other DBs
NCBI-GeneID:
124219139
NCBI-ProteinID:
XP_046482288
LinkDB
All DBs
Position
5:1978806..1983013
Genome browser
AA seq
607 aa
AA seq
DB search
MYELSEGALDQIMNGVEVEKPILQILGHKKLQSASTQERYRLLVSDGKRINSYAMLATQL
NSLITNDQLTEFSVCQVNRYAISMINNSGTQKRVMVILNIDVKIPGTEVGCKIGNPTQQD
GNVQNGDSTPAARSAAPVPKTNNSSNSVRPGRQQQSYLNDSVSSGAGISTTPIEALSPYQ
NRWVIRARVANKSAIKTWSNARGEGSLFSMDLVDETGEIRCTAFRDQCDKFYNMIEFGKI
YYISRCQLKPANKQFSNLKNEYEMTMTSETEVVPCHDDSDEIPTVKYDFAPISEIDGKEP
NAIIDVLGVCKSCSDITTVVARTTRKELKKRDVNLVDESNTMVTLTLWGTQADEFDGSSN
PVVAVKGARLAEFNGGKSLSTLNSSVLQIDPDIPEAHRLRGWYNTTGCTENVHTISKGLG
GGSGGMNGPWLTFKEAKDMQLGCRETPDYFIVKATINMIRTENSLYKACPTDDCKKKLID
QSNEMYRCEKCNRNYPNFKYRLLASINLADWTDNQWVTAFNEEAEKILGMTAQEIGELKD
NDDEAFLEKFGESAFKTFLLKLRVKMENYSDENRLKSTVVNVTPLDIKSYNNHLIAQIKE
LSNMGKA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaacttagtgaaggagccttggaccaaatcatgaacggtgtcgaggtcgaaaag
ccgattttacagatattgggacacaaaaagctgcaatcggcgagcactcaggagcgctat
cgcctcctagtttcagatggcaaaagaattaactcatacgcgatgttggctacgcagcta
aactcgctgattaccaacgaccaactgacagagttttccgtgtgccaagttaatcgatac
gcaattagtatgatcaacaattcaggaacacagaagagagtgatggtcatactcaacatt
gacgttaagattccgggcactgaagtgggctgcaaaataggaaatcctacccagcaagac
ggcaatgtacagaacggagattctactcctgctgcccgatcagcagcgcctgtaccaaaa
actaataattcctcaaattctgttcgtcctggacgacagcagcaatcttatcttaatgat
tcagtatcctctggtgctggtatctcaactacaccgatagaagccctgagtccttatcaa
aacaggtgggtaatcagagctagagtagccaataagtcagctataaaaacgtggagcaat
gcacgtggcgaaggttccctcttttctatggatttagtcgatgagactggcgagattcgc
tgcactgcattcagagatcaatgtgacaaattttacaacatgatcgagtttggcaaaatt
tactacatttcacgttgtcaactgaagccagcgaacaagcaattcagtaatttgaaaaat
gaatacgagatgacaatgacatccgaaacagaggttgttccttgtcacgacgattctgac
gagatcccaacagtgaagtacgattttgcaccaatcagtgaaattgatgggaaggagccg
aatgcaataattgatgtgcttggcgtttgcaaatcttgtagtgatatcacaactgtagtt
gcgaggactacaagaaaagagcttaagaagagggatgtcaatcttgttgacgaaagcaat
acaatggttactctcacattatggggaacccaggcggacgagtttgatggatcttctaat
cctgttgttgccgtgaaaggtgcacgtcttgccgaatttaatggtggaaaatctctgtct
acccttaactcgtcagtgctccagattgacccagacattcccgaagctcataggctccgt
ggttggtacaacacaactggatgcacagagaatgtgcataccatttctaaggggttgggc
ggtggcagtgggggaatgaatggtccgtggttgacgttcaaggaggctaaagacatgcag
ctgggctgcagagaaactcccgactacttcatcgtcaaggcaactatcaatatgataagg
accgaaaactctctttacaaagcgtgcccgaccgatgactgtaaaaaaaaacttatcgat
cagtccaatgaaatgtatcgttgtgaaaagtgtaacaggaactatccaaacttcaaatat
cgactgctggccagtatcaatctcgcagactggacagacaaccaatgggtaaccgcgttc
aatgaggaggctgaaaagattttgggaatgacggcacaagaaattggtgaattgaaggat
aatgatgatgaagcgtttcttgaaaagttcggtgaatctgctttcaaaactttccttctc
aaattgagagtaaaaatggaaaactatagcgatgagaacagattgaagtccaccgtagtg
aatgtgacgccgctggatattaaaagctacaacaatcatctgatcgcgcaaattaaagaa
ctttccaacatgggcaaggcataa
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