Neodiprion pinetum (white pine sawfly): 124219323
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Entry
124219323 CDS
T08966
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124219323
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
PAH_ZNF598
LAMB1
Motif
Other DBs
NCBI-GeneID:
124219323
NCBI-ProteinID:
XP_046482664
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Position
5:complement(33192060..33199979)
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AA seq
1767 aa
AA seq
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MVAVMAAPAAAQRPYGRIRGAQRRYPVKNLRPCDEGPCYPATGNLLIGRENRLTASSTCG
LNGPERFCIVSHLKERKKCFYCNAAIRKQRHNVENITYTHSPRTLGDSWWQSENGVENVT
LQLDLEAEFHFTHIIIRFQTFRPGAMLIERSSDYGKTWRVYKYFAHNCEQTFPHVPTHVP
QKLNDVVCDSRYSTVDPSTDGEIIFRVLLPNVQIDNPYSQEVQNLLKMTNLRINFTRLLT
LGDDLLDNRAEIKEKYYYAIKDMAVRGSCSCYGHASRCLPLPGIPNRQDMVHGRCECTHN
TKGLNCEMCEDFYNDLPWKPAAGKQTHACKKCNCNNHATSCHFDRATYDRTGRVSGGVCD
DCQHNTQGQNCEICKPFYYHDFTRDISDPDACQPCDCDQLGSLDDGICDPLTDMLTSQES
GRCHCKLNVEGRRCDRCKAGFWNFSPENPEGCQACSCHALGTVDLHGCDVSSGKCTCKPY
VIGRDCDQCYPEFWGLSDDREGCKPCDCDLGGAYDNLCDVVTGQCSCRAHIDGRTCNEPE
QNHYTVALDYLVYEGERSKTNKSQIVIREPYRDGRTNTWTGPGFIRAFEGSTLEFTIDDV
VKSMEYDIVLRYESEVPGILEEAQIFVEREEDVDPEGACANWEPEDDELYIRLPVNSRSA
VAVPSVCLEKGKKYIVVLQFKNSYDRVGGPTASILIDSIVLMPKVEGIPFFAGSPPSEMR
RQDFERRHCDEIFYNVIPSGETNEVDICAQYRKSIGYFIFDGAPSCECNPTGSNSLLCDQ
YGGSCPCKPNIVGRRCDRCAPGTYGFGPAGCVPCDCDSVGAEDNFCDFETGRCKCRPNTY
GRTCGECDPGFWNFPHCERCKCNGHAQTCDSVTGACHDCQDFTTGHQCDRCAVKYYGDPQ
IGVDIPCRPCPCPGTWDSGHSFADRCSLDPVTLDVVCECYEGYAGARCDICAENYFGSPD
VQTGRCVPCDCNNNTDLSQPGNCNPHTGRCLQCLYDTDGPNCQICKPDFYGDALKQDCKE
CGCNVLGTNFRDGHCNHRDGQCPCLPNVIGQYCDTCVENHWRIASGEGCDPCDCDVIGSV
SEKCNEYDGTCQCRSGFGGRQCNQCETNHWGNPNIECLPCECNLIGSSTQQCDRETGACI
CLAGIGGVKCDHCDRGYLGVAPSCIPCGECFKNWDLTLSGLSNRTYDVIDAASKIQKIGT
AGIYSQEFDNMDEVLMGVRELVNKTSVTAEDLLELVDFANNLNNTVSFSDAILDEVDNYI
GSISQRVSLGEVALQNMKNRTVSLIEAAAELKENATVLQEADVYGALNLTHQMAKQSDQA
EALASSSTTALADADRYQKNTENLLAKRSESFTDKLNENDNSLKRLKGELDEFNQLIPDL
NLAMCGASVDECDELCGGAGCGFCGGLSCDDGAVTEAERALDLAKQRAAGIKKHKDESEQ
LLRNMTQMKDDAVAAKHLAQLGLNAAFETYNFSSNFTKNLENLHSRISNSLNEEQPSPAM
VKDLAEKVLEKNIKLNPDEIKDLADSIRSIVGSLTDSEKILEDAAEDLELAEILRDEAVR
AKDSAVAQSTRAGNIVVFLTEAEIAAEDAQLAIDEIERHISLSHNDLTDILIEIDAVAEK
ADNTTAEIDDLDRRLTELQTQIVKNDFILTQEIGSEIGDVTVEAENTRMKTKKLVQEFEV
ANQAVRLKAEKSEGKISRSKLLLQRASELAADTTTKFKDINGMEGTYAENEKTLADLMSE
VESLTRQMEKHLNHIQHKSQTYAQCST
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagtgatggcagctcctgctgctgctcagcgtccctatggcagaatccgagga
gcgcagagaagatacccagtaaagaatctacgcccttgcgacgaaggaccatgctatccg
gcgactggaaatttactaattggtcgagagaacagactgacagcatcgtcgacctgtgga
ttaaacggaccggaaagattctgcatagtgtcccatctgaaagagaggaaaaagtgtttc
tattgtaacgccgcgattcgtaagcaacgacacaacgtggagaacatcacatacactcat
agccctcgaacccttggcgactcttggtggcaatcggagaatggagttgaaaatgtcact
ttacaattggatttggaggcagaatttcactttacgcatattataataaggtttcagacc
tttagaccgggggccatgttgatcgagcgatcatcagattacggcaaaacgtggcgtgtt
tacaaatacttcgcccataattgcgagcagacatttcctcatgtaccaactcacgtgccc
caaaaattaaacgacgttgtctgtgactcgcgttactcaaccgtcgatccgtcgactgac
ggcgaaataatcttcagggtattgttgcccaatgtgcagatcgacaatccctattctcag
gaagtgcaaaatcttctgaaaatgaccaatctgagaataaacttcacgaggcttctcact
ctcggtgacgacttgttggacaatcgggctgagatcaaagaaaagtattactacgctata
aaagacatggctgttcgaggatcctgctcgtgctatggacacgcctcgaggtgcttgcct
ctgcctggtatacctaaccgccaggacatggttcacggacgctgtgaatgcacgcacaac
actaagggactgaactgtgaaatgtgcgaagacttttataacgacctaccttggaaaccg
gcggctggaaaacagacccatgcctgtaagaagtgtaactgtaacaatcacgccaccagt
tgtcacttcgaccgagccacctacgacagaactggcagagtttccggcggtgtctgtgac
gattgtcagcataacacgcagggacagaactgcgagatttgcaaaccgttttactaccat
gacttcaccagagatatcagtgaccctgatgcctgccaaccttgcgattgtgaccaactt
ggttcgttggacgacggcatttgcgaccctctgaccgatatgttgactagtcaggaatca
ggccgctgccattgcaagctgaacgtggaagggcgtcgctgtgaccgctgtaaagctgga
ttctggaactttagtccagagaatccagaaggctgtcaagcctgttcttgtcatgcactc
ggcacggttgatttacatgggtgtgacgtgtcctctggaaaatgcacttgcaagccatac
gtaattggtcgcgattgtgatcagtgctacccagagttttggggcctctccgatgaccga
gaaggctgcaagccgtgcgactgtgatcttggaggtgcttatgataacttatgtgacgta
gtaactggccagtgcagctgtagggcacatatcgacggcagaacttgcaatgaaccggag
cagaaccattacacagttgctctagattatctggtttacgaaggagaacgaagcaaaacc
aataaaagccaaatcgtgatccgagaaccatatcgtgatggtagaaccaatacctggacc
ggaccaggtttcataagagcctttgaaggttcgacgttggagttcacgatcgacgatgta
gtgaagtccatggaatacgacatagtcttacgttacgagtccgaggtcccgggtatttta
gaagaagctcagatatttgtcgaacgagaggaagacgtggaccctgaaggggcatgtgct
aattgggaaccggaagatgacgaactgtatattcggcttccggtgaactcgcggagcgcc
gttgcggtaccgtcagtgtgtcttgagaaagggaaaaaatacattgtagtcctccagttc
aagaattcgtatgaccgtgtaggcggccccacagcttcaatactgattgactctatcgtc
ctgatgcccaaagtggaaggtatcccgttcttcgcgggttctccacccagcgaaatgcgg
agacaagacttcgaaaggcgtcattgcgacgagatattttacaatgttatcccatccggg
gaaactaacgaggttgacatttgtgcgcagtaccgcaaaagcatcggttattttatcttc
gatggagcaccctcctgcgagtgtaatccgacgggatccaacagtctgctgtgtgaccaa
tacggaggctcgtgtccgtgcaagccaaacattgttggtcgacgttgcgatcgttgtgct
cctgggacatatgggtttggtccagctggttgcgtgccatgcgactgtgacagcgtcggc
gctgaggataatttctgcgattttgagacagggaggtgcaagtgtaggccaaacacgtac
ggaagaacatgcggcgagtgtgatcctggcttttggaacttcccacactgcgagcggtgc
aagtgcaacggtcacgcccagacctgcgattcggtgacgggggcttgtcacgactgccag
gacttcacaactggtcaccagtgcgatagatgtgccgtaaagtattacggagaccctcaa
atcggggttgacattccatgcaggccttgtccttgtccgggaacttgggactccggccat
tcgttcgctgacaggtgttctctagaccccgtcacgttagacgtggtgtgcgaatgttac
gaaggatacgccggagccaggtgtgacatttgcgctgaaaactactttggtagtcccgat
gtgcaaacgggaagatgcgtgccctgtgactgcaacaacaacaccgatctgtcgcaacca
gggaattgcaacccgcacactggacgctgtctccaatgtttgtacgacactgacggacca
aattgtcaaatctgtaagcccgacttttacggtgacgcgctgaaacaggattgcaaggag
tgcggatgcaacgtcctcggcaccaacttccgcgacggtcactgcaatcatcgtgatgga
cagtgtccatgtctgccgaacgtcattggtcagtactgtgatacctgcgtagaaaaccac
tggagaattgccagcggagaaggctgcgatccgtgcgattgcgacgtgattggaagcgtg
tcagaaaaatgtaacgagtatgacggtacctgccaatgtcgctctggctttggaggaagg
cagtgtaaccagtgcgaaacgaatcactggggcaatcccaacatcgagtgtctgccgtgc
gagtgtaacctcatcggatcatccactcaacagtgtgacagggaaactggggcctgcata
tgtctggctggaattggaggcgtcaagtgcgaccactgcgaccgtgggtaccttggagtt
gctccgagctgcattccgtgtggcgaatgttttaaaaactgggatctgacgctgagtggt
ttaagcaacagaacatacgatgttatagacgcagcatcgaaaattcagaagattggaaca
gccggaatttacagtcaggaatttgataatatggacgaagtactgatgggggttcgagag
ctcgtcaacaagacgagcgtcacggccgaggaccttctcgagctcgttgattttgccaat
aatctcaacaacacagtttccttctcggacgccattctcgacgaagtcgacaactacatt
ggatccatcagtcagcgggtcagtctcggtgaagtggctcttcagaacatgaagaaccga
acggttagcttgatcgaagccgctgctgagctcaaagagaacgctacagtcttgcaggag
gccgatgtctacggtgctctgaacctaactcaccaaatggcgaagcaatcggaccaggca
gaagcgctggccagtagttcaacgaccgctttagcggacgctgacagatatcagaagaac
actgaaaacttgcttgccaagcggtcagagtctttcactgacaagctcaatgagaacgat
aattccctgaagagactcaaaggtgaactcgacgaattcaaccagctgattcccgacctc
aatctcgccatgtgtggagctagtgtcgacgaatgcgacgaactatgcgggggtgctggc
tgcggtttttgtggtggtctttcttgcgatgacggtgcagttacggaggcagaaagggcc
ttggatcttgccaagcagcgagctgccggtataaagaaacacaaagacgaaagcgaacag
ttacttagaaacatgacgcaaatgaaagatgatgctgtagccgcgaaacatctcgctcaa
ctcggcctgaatgctgcattcgagacttacaacttctcgagtaacttcacgaaaaatctg
gaaaacctccacagcagaatatctaatagcctgaacgaagaacaaccgagtccagcgatg
gtgaaagacttggctgaaaaggtgctggagaaaaacataaagttgaacccagacgagatc
aaggacctggctgacagcataagaagcatcgtcggttcgctgacggattctgagaagatc
ctcgaggatgctgcggaagatttggagctagctgaaattctgcgagacgaggcagtgagg
gctaaggattcggctgtcgcgcagagtacgcgggctggaaacatagtcgtgtttttaaca
gaggcggaaatcgctgcggaagacgcacagttggccatagacgagatcgagcgacacata
tccctgtcccataatgatttgaccgatatactgatcgagattgatgcggttgcggaaaag
gctgacaacactactgcagaaattgacgatttggacaggcgtttgaccgagcttcagact
cagatcgtaaaaaatgactttatattgacgcaagaaatcggttcagaaatcggcgacgtc
acggttgaggctgagaacacgagaatgaagactaaaaaattggttcaagaattcgaagtg
gcgaatcaggcggtgaggctcaaggccgaaaagagtgagggaaaaatttctaggtcgaaa
ctacttctgcaacgggcttctgagctcgctgctgacacgaccaccaaatttaaggacatt
aatggaatggaaggaacctacgcagagaacgagaaaaccctggctgacctcatgtccgag
gtcgagtccctcacgcgtcaaatggaaaaacacttgaaccacattcagcacaagtcacag
acctatgctcagtgctcgacgtag
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integrated database retrieval system