Neodiprion pinetum (white pine sawfly): 124219480
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Entry
124219480 CDS
T08966
Symbol
Atg18a
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04136
Autophagy - other
npt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124219480 (Atg18a)
04136 Autophagy - other
124219480 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124219480 (Atg18a)
03029 Mitochondrial biogenesis [BR:
npt03029
]
124219480 (Atg18a)
Membrane trafficking [BR:
npt04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
124219480 (Atg18a)
Mitochondrial biogenesis [BR:
npt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124219480 (Atg18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
DUF7165
Beta-prop_TEP1_2nd
EIF3I
BCAS3_WD40
VID27
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
124219480
NCBI-ProteinID:
XP_046483027
LinkDB
All DBs
Position
5:complement(27841394..27852933)
Genome browser
AA seq
467 aa
AA seq
DB search
MQNLARNVDVLTQGFKYGISGLMNLASQTSDPQSGVFFVNFNQDCTSLAVGTKSGHKIFS
LNSVDHLEKIYENDSEDICIVERLFSSSLVAVVSLSSPRKLKVCHFRKGTEICNYSYSNT
ILAVKLNRARLVVCLEESLYIHNIRDMKVLHTIRDTPPNLAGLCTLSINSDSCYLAYPGS
NTIGEVQIFDAINLQAKTMIPAHDSPLAALAFNPSGNKVATASEKGTVIRVFHVHDGAKL
FEFRRGVKRCVSISSLAFSMDSLFLCCSSNTETVHVFKLEEPKEAPASEEVQSWMGFFTK
AVSASANYLPSQVTDVFNQGRAFASVHLPFQGLRNVCAITTIQKVLRLLVASADGYLYVY
NLDMVEGGDCTLLKQHRLDGKPDEIDGPTVSTTASATVETPAAAQTVQNTGCINSYAGAL
RGRSPDAMSGTDSEKFHEMVAATESPPKGGFRLDDDTEFPPVTQRTD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatctagcgcgcaacgttgatgtgttgacacagggatttaaatacggaatatct
ggactcatgaaccttgcaagtcaaacctcggatcctcagagtggtgttttctttgttaat
ttcaatcaagattgcacatccctcgcagttggcacgaagtctggccacaaaatcttctcg
ctcaactctgttgatcacctggaaaaaatttatgaaaatgattctgaagacatatgcatt
gtcgagcggctgttcagcagcagtcttgtggcagtggtcagcctctcctccccccgtaag
ctgaaagtatgccattttcgtaaagggactgaaatctgcaactacagttattccaatacc
attttggctgtgaaattgaatagagcgagactggtggtatgtctcgaggaatcactctac
attcacaatatcagggatatgaaggtgcttcatacaatccgtgacacacctccgaatctc
gcgggactctgtacgctctccataaacagcgacagttgttacctcgcctatcctggctca
aacacaataggagaagtacagatattcgatgccatcaaccttcaagccaagacgatgata
ccagcacatgacagccctttggcagctcttgcctttaatccatcaggaaataaagtagcg
acggcttcagaaaaaggaactgttatcagagttttccatgtacacgatggtgctaaatta
ttcgaatttcgacgaggtgttaagagatgcgtatctatcagcagccttgcatttagtatg
gactctctgtttctttgctgttcgagtaacactgaaactgtgcacgttttcaaactggaa
gaaccaaaagaagcaccagcttcagaggaagttcaaagttggatgggcttttttacaaaa
gcagtatcggcatcagcgaattatttgccatctcaggtaactgatgttttcaatcaggga
cgtgcttttgccagcgtacatctacctttccagggactgagaaatgtttgtgccatcact
acgatacagaaagtgttgaggctattagtggccagtgcagatggatatctctacgtttat
aatcttgatatggtagaagggggagattgcactctactgaaacagcacaggctggacggc
aagccggatgaaatagatggtccaaccgtatctacaacagcatctgcaactgtagaaaca
cctgcggcagctcaaacagtacaaaacacaggctgcataaatagctacgcgggtgcattg
cgcggccgctcgccagacgccatgtcaggtactgactcagaaaagtttcacgagatggta
gctgctacggaaagtccacccaagggcggttttcgtttggatgacgacaccgagtttcca
ccggtcacacaaaggactgattga
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