Neodiprion pinetum (white pine sawfly): 124219578
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Entry
124219578 CDS
T08966
Symbol
RpII33
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03020
RNA polymerase
npt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124219578 (RpII33)
09124 Replication and repair
03420 Nucleotide excision repair
124219578 (RpII33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124219578 (RpII33)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124219578 (RpII33)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124219578 (RpII33)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124219578 (RpII33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
124219578
NCBI-ProteinID:
XP_046483269
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All DBs
Position
5:22273441..22275047
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AA seq
276 aa
AA seq
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MPYANQPSVHITDLTEENVKFQVEDTELSVANSMRRVFIAETPTMAIDWIQLEANSTVLS
DEFLAHRIGMIPLISDDVVDRILYTRDCQCMDFCPDCSVEFTLDVKCAEDQTRHVTTADL
KSSDPRVLPVTSRHREDDASEYGETDEILIVKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNAMRHTLFPKPDEWPKSEYTELDEDQYEAPFNWEAKPNKYYFNVESSGALK
PENIVMMGIVALKNKLSNLQTQLSHEVQNDALSIHH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaatcagccttcggttcatataaccgatctcacagaagagaacgttaaa
tttcaggtagaagacaccgaactaagcgtagccaacagcatgaggcgagtgtttattgcc
gaaactccgacaatggccatagactggatacagcttgaagcgaattcaacagttttaagc
gacgagtttcttgcacataggattggaatgataccgttgatcagtgacgacgtggttgac
agaattttatacacaagggactgtcagtgtatggatttctgccctgactgcagtgtcgaa
ttcacactggatgtcaagtgcgcagaggatcaaactagacatgtgacaacagccgatctg
aaatccagtgaccccagagtgctgccagttacttcgagacacagagaagacgatgcaagc
gaatatggagagacagatgaaatactcatcgtcaaactgcgaaaaggccaggaactaaag
ctgagagcttatgcaaaaaagggatttggaaaagaacacgccaagtggaaccccactgct
ggtgtcagctttgaatatgatccagacaatgcgatgcgtcatacattgtttcccaagccc
gatgagtggccaaagtcggaatatactgagctcgatgaagatcagtatgaagcgccgttc
aactgggaagcgaagcctaacaagtattatttcaatgtcgaaagcagcggtgctctgaag
cccgaaaatattgtcatgatgggtatagttgccctgaaaaacaaattgtctaatctgcag
acacagctgagccacgaagtacaaaatgacgcacttagcattcatcactaa
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