KEGG   Neodiprion pinetum (white pine sawfly): 124219593
Entry
124219593         CDS       T08966                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124219593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:npt04121]
    124219593
Enzymes [BR:npt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124219593
Ubiquitin system [BR:npt04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124219593
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     124219593
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st zf-C3HC4_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_EML WD40_MABP1-WDR62_2nd DSE1_N ANAPC4_WD40 zf-C3HC4 Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_DCAF12 zf-RING_UBOX zf-RING_2 WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 RING_XB3-XBAT31 zf-C3HC4_3 Beta-prop_Aladin WD40_RFWD3 zf-RING_5 Beta-prop_IFT140_1st zf-C3HC4_4 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_RIG_1st TRAF3_RING zf-RING_10 SLX5_C zf-rbx1
Other DBs
NCBI-GeneID: 124219593
NCBI-ProteinID: XP_046483296
LinkDB
Position
5:8121870..8184274
AA seq 667 aa
MAAEEGPNLSGARSGARATLKRPLNASSVMQGIGGTLEDKSSDYLCPICFEVINEAHITR
CGHTFCYRCIVRSLEVSSRCPKCTFALGQQDIFPNFLLNELIAKYKTRLRGVAELRRGRG
DSWINGDEVGSSSFIPSNDGLRDFVASESAHLSLSDVNVMLEVLTQKKLLLEAESCASQN
KLLHEFLKHLLRRKEEQRNQLTKEVALIKRDMAEVEKILRDIQSRCPRVEDLNASSETDT
AQVSAIKKEMISLLGMIDSAMQSDGGDEAFPTVAARTPTGSVLALRRKRMHAHFDDFVKC
YFDSQAKELHFGRDRAAAAANQGSSSGLNVFRENLVKFSRYSALRQLATLNYSSDIFNSS
TIVSSIEFDKDSDFFAIAGVTKRIKVFDYGAVIRDAVDIHYPCVEMVSSSKISCISWNSY
HKALLASSDYEGTVTVWDAETGQRTKAFQEHEKRCWSVDFNDVDTRLIASGSDDARVKLW
SLNVDHSVASLEAKANICCVKFNPRSSCHLAFGSADHCVHYYDLRNMKEPLCVFKGHRKA
VSYVKFINGENIVSASTDSQLKMWNVNSPHCLRSLVGHVNEKNFVGLATDGDYVACGSEN
NALYVYYKGLSRQLFSYKFDAARSVLELQERKEEETNEFVSAVCWRQMSNVVVAANSQGI
IKILELV
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggcggccgaggagggtcccaacttgtcgggggcccgaagcggggcccgggcgaccctg
aaacggcccctcaacgcgtctagcgtcatgcagggaatcggtggcaccctggaggacaag
agcagcgactacctctgcccgatatgcttcgaggtgataaacgaggcgcacataacgcgg
tgcggacacacattttgctaccgctgcatagtgcgatcgctggaagtgagctcgaggtgc
ccgaaatgcaccttcgccctcggccagcaggacatctttcccaattttctgctcaacgag
ctcatcgccaagtacaaaacgcggttacgaggagtcgcggagttgagacgaggccgcggg
gactcgtggataaacggcgacgaggtgggatcctcgtcttttattccgtcgaacgatggt
ctgcgcgactttgttgcgtctgaaagcgctcaccttagcctctccgacgtgaacgtgatg
ttggaggtccttacgcagaagaaactgctccttgaggcggagtcttgcgcctcgcagaac
aagcttctccacgaatttctcaaacaccttctccgtcgaaaggaggaacagcgtaaccag
ctgacgaaggaggtcgctttgatcaagcgtgacatggccgaggtcgagaagattctcagg
gacattcagagccgatgtcctcgcgtcgaggaccttaacgcatccagcgaaacggacacc
gctcaggtctcggcgattaaaaaagagatgatcagcctgttggggatgatagactccgcg
atgcagagtgacggtggggacgaggcttttcctaccgttgcagcgcgaactccgactggc
tcggttctcgcgctgaggaggaagcggatgcacgcgcacttcgacgacttcgttaagtgc
tacttcgactcacaggcgaaggagctccactttggaagggatagagcggcggccgcagcg
aaccagggatcctcttcagggctgaacgtcttcagggaaaacctggtaaagttctcaaga
tacagcgctctgcgtcaactcgctacgctcaactactcctcggatatattcaacagctcg
accatcgtctcgagcattgagttcgacaaggacagcgacttcttcgcgatagccggggtc
acgaagcggataaaggtcttcgactacggtgccgtgattcgtgacgcggtcgacatccac
tatccctgcgtcgagatggtatccagctctaagatatcctgcatatcgtggaactcgtat
cacaaggcgttgctcgcttcgtctgactacgagggtaccgttaccgtctgggatgccgag
actggtcaacgtaccaaggcctttcaggagcacgagaagcggtgctggtccgtagacttc
aacgacgttgacacacggctgatagcttctggctctgacgacgcccgcgtaaagctctgg
tcccttaacgttgaccactctgtcgcctctctggaagctaaggcgaacatctgctgcgta
aagtttaacccccgaagctcctgccacctggccttcggctccgcggaccactgcgtacac
tattacgacctcaggaacatgaaggagccgctctgcgtgttcaagggtcaccgaaaggca
gtgtcctacgtcaagttcattaacggcgagaacatcgtttcggcaagtaccgactcgcag
ctcaagatgtggaacgtaaacagtcctcactgcctcagatctttggtagggcacgttaac
gagaagaactttgtcggtttggcgacagatggcgattacgtcgcatgtggatcggagaac
aacgcactctatgtttactacaagggactatcgcggcaactcttctcctacaagttcgac
gcagccaggagtgtccttgaacttcaggaacgcaaggaggaggagaccaatgagtttgtc
tcggccgtatgctggcggcagatgtcaaatgttgtcgtggcggccaattctcaggggatc
atcaagatcctcgaacttgtctga

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