Neodiprion pinetum (white pine sawfly): 124219815
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Entry
124219815 CDS
T08966
Symbol
Mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03430
Mismatch repair
npt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124219815 (Mlh1)
03460 Fanconi anemia pathway
124219815 (Mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npt03400
]
124219815 (Mlh1)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124219815 (Mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124219815
NCBI-ProteinID:
XP_046483925
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Position
5:complement(24055272..24064329)
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AA seq
824 aa
AA seq
DB search
MSRPAKIRKLDETVVNRIAAGEVIQRPANALKELIENSLDAKASSIQVTVKEGGLKILQI
QDNGTGIRKEDMDIVCERFTTSKLQQFEDLKSIATFGFRGEALASISHVAQLTITTKVAD
DPCAYKASYIDSKLKAPPKPCAGSQGTTILIENLFYNVPTRRRALKSPAEELSRITEVVN
KYAIHNSNVGFVLRKHGDIVPQVRTQHNSTKVANIQTIFGVAVARELLEVEHTDDTYKFK
LCGLVTNANYSNKNFTLLLFINNRLVESTPIKKMLEDLYSVYLPRKAHPWCYISLEINPA
NIDVNVHPTKHEVRFLHEEAIIGKVKDAVDAQLLGNNASRTFYAQARLPQVDITKQALEE
VIPEYSNAGNKEKPVHAYQMIRTDSSDQKLEKFNFTVNTSSANQSLNESKEVKSTIVTEN
KEDGQPKRLNPTKYAAEKAPNESSFFDSLLEDCLPHQTSTQVENLAKPSTSYAPLDGNTK
AQDVSEIENDEVEKAVSGGDSTTDEALKRVFQYLGNRDNIDYVKTIVEPGSSQDLADRHD
GSKTKKTDSQITSPSENATAETKSGSKPKRPEFKSYSVNATRREVKLTSVLKLRKNVEDN
YHEGLRDILSNMIFVGCVDETFALIQSGLNLYICNTPKLLEELFYEIMLYDFENYGVMQF
SEPVSLSDLAMLGLETEEAGWTEEDGEKEELANSVKELLLEKADMMNEYFSIIIDKKGML
KSLPILLDKYFPSKAGMPLYVLRLATEVDWTAEQSCFDGICRETAKYFSYVSRNDENPEW
QNVTEHILYPAIKNSLLPPKHFAHDSTILQIARLPDLYRVFERC
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggccggctaaaataagaaagctagatgaaactgtggtgaacagaatagccgcc
ggggaagttattcagcgaccagcaaacgctctgaaagaactgatcgaaaacagcctcgac
gccaaggccagcagtattcaagtcacagtcaaagaaggcgggttgaaaatacttcagatt
caggacaatggaacggggatcaggaaagaggacatggacattgtctgcgaacgatttact
accagcaaactacagcaattcgaagacctcaaatcaatcgccacctttggcttcaggggt
gaagctcttgccagtatcagccacgtagctcagctgacgatcacaacgaaagtcgccgac
gacccctgtgcgtacaaggcctcgtacatagacagtaaattgaaagcacctccaaaacct
tgcgctggtagccaaggtacgacaatattgatcgaaaatctgttttacaacgtccctact
agacggagagcattgaaaagtccagccgaggagctttccaggataacagaagtcgtgaat
aaatatgcaattcataattctaacgttggttttgttctgagaaaacatggggacatcgtt
cctcaggtacgaactcagcacaattctacaaaggttgccaatattcaaacgatattcggt
gttgctgtggcgagggagttgctggaggtcgagcacaccgacgatacgtacaaattcaaa
ctatgcggtctagtaacgaacgcgaattactcaaacaaaaactttacacttctgttgttc
atcaacaacaggctcgtcgaatctaccccaataaaaaaaatgttggaggatctctactcg
gtttatttgccgagaaaggcacacccctggtgctacatatctcttgagataaatccggct
aatatcgacgtgaacgtgcatccgacgaagcacgaggttcgttttctccatgaagaggct
ataataggaaaagtgaaagacgccgtggacgcacaactgctcggaaacaacgcatcgcga
actttttacgcccaagcgagattgcctcaagtcgacattacgaaacaagcgctggaagaa
gtaattccagagtacagcaatgccgggaacaaagaaaagccagtccacgcttaccaaatg
atcagaacagattcctccgatcaaaaactggagaagttcaatttcacagtcaacacatcc
agcgccaaccaatcgctcaatgaatccaaggaggtaaaaagcacgattgttacggaaaat
aaggaagacggacaaccgaagcgattaaatccgacgaaatatgctgcggaaaaggccccc
aacgaatcgagttttttcgacagtttgttagaggattgcttaccgcatcaaacctctacg
caagttgaaaatcttgctaaaccttcaaccagttacgcgcccctcgacggtaacacaaaa
gctcaggacgtctcggagatcgaaaatgacgaggttgaaaaagccgtcagtggcggcgat
tctaccaccgatgaggcacttaagagggtttttcagtacctgggtaatcgggataacata
gattacgtaaagacaatcgtcgagccaggaagtagccaggatttagctgatcgacatgac
ggttccaaaacgaagaagactgattcgcaaatcacgtcgccgagtgaaaatgcgacggct
gaaacaaagtccggcagcaagccgaagagaccagagttcaaatcttactcggtaaatgcg
acaaggcgagaggtgaagctcacgagcgtgttgaaacttcggaaaaatgtcgaagacaac
taccacgaagggctgagggacatattgtcgaatatgatttttgttggctgcgttgacgaa
acttttgccctcatacagagcggactcaatctgtacatatgcaacaccccgaagttattg
gaagaacttttctacgaaataatgctgtacgactttgagaattacggtgttatgcaattc
tcggagcccgtctcactgtccgacctcgctatgctaggactcgaaaccgaggaagccggg
tggacagaagaagacggcgagaaagaggaattggcgaatagcgtgaaagaattattgctg
gaaaaggccgatatgatgaacgagtacttttcgattataattgacaaaaaggggatgtta
aagtccctgcctatactgctggacaagtactttccaagcaaggctggaatgccattgtac
gtgttgcgtttggcgacggaagtcgactggaccgcggaacaatcttgtttcgatggaata
tgcagagaaacggccaagtacttcagctatgtaagtcgaaatgatgaaaatccggagtgg
caaaacgtcacggagcatatcttataccctgccataaaaaacagcctcttaccgccaaaa
cacttcgcccacgattccactatcttgcaaatagcaaggctacccgatttgtatagagtc
tttgaaagatgctga
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