Neodiprion pinetum (white pine sawfly): 124220445
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Entry
124220445 CDS
T08966
Symbol
Atg4b
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04136
Autophagy - other
npt04140
Autophagy - animal
npt04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124220445 (Atg4b)
04140 Autophagy - animal
124220445 (Atg4b)
04136 Autophagy - other
124220445 (Atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npt01002
]
124220445 (Atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124220445 (Atg4b)
03029 Mitochondrial biogenesis [BR:
npt03029
]
124220445 (Atg4b)
Peptidases and inhibitors [BR:
npt01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
124220445 (Atg4b)
Membrane trafficking [BR:
npt04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
124220445 (Atg4b)
Mitochondrial biogenesis [BR:
npt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124220445 (Atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
124220445
NCBI-ProteinID:
XP_046485288
LinkDB
All DBs
Position
5:33768227..33771982
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AA seq
474 aa
AA seq
DB search
MNGQLQSSRERLGAFSGGAGWFTGFVTPGHTVSSQKISQISVDDSSNGAEVDGKMKKKLM
SMWNNVKYGWSIKIKTNFSKESPVFLLGSCYHKRQNEDSPERAVEAVGLDMGTGSNVSLA
KDACTLEQGMDGFRKDFTSRLWLTYRREFPILNGSNFTTDCGWGCMLRSGQMMLAQALVC
HFLGREWRWRPDGSIDSVQQFHEDSQHRMIIKWFGDQPAPLSPLSIHALVSLGTAAGKKA
GDWYGPSSVAHLLKQAVERAAICHVEFDQLAVYVAQDCAVYMDDVAKVCQKPDGSWRSLV
LLVPLRLGMDKLNPGYAPCLTALLSLEDCIGVIGGRPRHSLYFIGYQEDKLIHLDPHYCQ
ETVDVWRRNFSLESFHCTSPRKMLLSKMDPSCCVGFYFRDKAAFDSFVTVVTPFLIPPNQ
KVEYPMFLFSEGSGADVQRSMENRKSVLSSSEESTKIEDDDSHYECEEFELCEW
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggcaacttcaatcctcgcgcgagaggttaggtgcattcagtgggggagcagga
tggttcactgggtttgttactcccggtcataccgtatcatcgcaaaaaatatcacaaata
tcggtcgacgactcgagcaatggtgccgaggttgatggcaaaatgaagaagaagctaatg
tcgatgtggaataatgtgaaatacgggtggagcatcaagataaaaactaacttctcgaaa
gagtctcctgtctttcttcttggatcctgttaccacaaaagacaaaatgaagattctcct
gaacgggcagttgaagctgtagggttggatatgggaaccggtagcaatgtgtcactggca
aaagatgcctgtactttagaacaaggaatggatggttttcgaaaggacttcacgtcccgt
ttgtggctgacttatcgacgggaatttcccatcttgaatggttctaactttacaacagat
tgtggctggggatgtatgcttagaagtggacaaatgatgttagcccaagcgctagtctgt
cactttcttggcagagaatggaggtggcgacctgatgggtccattgattcagtccagcaa
ttccatgaagattcgcagcacagaatgatcatcaaatggtttggggatcagccagcccca
ctgtccccactctccatacacgctttggtctctttaggtacagctgctggaaaaaaggct
ggagattggtacggtccatcgtcagtagctcatcttctcaaacaggctgtcgaacgtgct
gcgatttgccatgttgaatttgatcagcttgcagtatatgttgcacaggattgtgccgta
tacatggatgatgtagcaaaggtgtgccagaaacccgatgggagttggaggtctctagta
ctgttggttcctctaagactaggcatggataagttgaatcccggatacgcaccatgtctt
acagctcttctcagtttggaagactgcataggggtgattgggggacgtccgcgtcactct
ctttacttcattggttaccaggaagacaagctgatccatctagatccacattactgtcaa
gaaacggttgatgtgtggaggcgaaatttctcattggaaagttttcactgcacttcgcca
cgaaagatgcttctgtcaaaaatggaccccagctgttgtgtgggattttattttcgcgac
aaagctgcattcgatagttttgtgacagtagtaacgccctttttgataccacccaaccag
aaagttgagtatccaatgttcctcttcagcgaaggcagtggcgctgacgttcaacgcagt
atggagaatagaaaaagtgttttgtcatcgtccgaggagtccactaagatcgaggatgat
gacagtcattacgagtgtgaagaattcgagttgtgcgaatggtag
DBGET
integrated database retrieval system
