KEGG   Neodiprion pinetum (white pine sawfly): 124220538
Entry
124220538         CDS       T08966                                 
Name
(RefSeq) DNA polymerase beta isoform X1
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124220538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npt03400]
    124220538
Enzymes [BR:npt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124220538
DNA repair and recombination proteins [BR:npt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     124220538
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     124220538
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 NTP_transf_2 HHH HHH_3 Cdd1 HHH_2 MG3 DUF4332 PS_pyruv_trans Autophagy_act_C
Other DBs
NCBI-GeneID: 124220538
NCBI-ProteinID: XP_046485554
LinkDB
Position
5:25643927..25647068
AA seq 337 aa
MSKRKAPDNADNLNSDLSDFLIELANYERNVSKNIYKYNAYRKAAGTLAALSYRVKNGEE
AKKLPGVGEKIAKKIDEFLQTGKLQKLEKINADGISAPINLMTRVSGIGPSKAKELVDAG
IKTLEDLRKNQDKLTHHQKIGLKYFQDFEQKIPREEVRRLETSLKSVIANLDKEYILTIC
GSYRRGKDESGDIDVLITHPKFTSESMDAKNKGGMLKNIVKYLEKEGIITETISIGNTKF
MGVCRDPAESSKPFRRLDIRVTPSDHYYCAVLYFTGSDLFNKNMRAHALKKKFTLNEYTL
KHLTLEGLPGNAELITSEEDIFSKLGLPYKKPEERNS
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgagcaaacgaaaggcacccgacaacgcagacaatctaaacagtgatctctccgatttt
ctgatagagctagcaaattacgagcggaatgtcagtaaaaacatctacaaatataacgct
taccgtaaagctgctggaactttggctgcactatcataccgagtgaagaatggtgaagag
gcaaaaaagttgccaggggttggagagaagatcgcaaaaaaaattgatgagttccttcaa
accggaaaattacaaaaacttgaaaaaattaatgctgatggcatcagtgctcctataaac
ttgatgaccagggtatcaggaattggaccatcgaaggcaaaggaattggtagatgctggt
ataaagactttggaagacctgagaaaaaaccaagataaattaacacatcatcagaaaatt
ggtttgaagtactttcaagattttgaacagaaaattccaagggaagaggtgcggcgactc
gagaccagtctcaaatcagtgattgctaatttagacaaagagtatatacttacaatctgt
ggtagttatagacgtggaaaggatgagagcggcgatattgacgtcttgataacacatcca
aaattcacatccgaaagtatggatgcgaaaaataaaggcggtatgctaaaaaatattgtt
aaatatcttgaaaaggagggaataatcacagagactatctctatcggcaacacaaagttt
atgggtgtttgccgagatccagcagaatcgagtaaaccatttcgccgacttgatataaga
gttactcccagcgatcactactactgtgccgtattatattttaccggcagtgatttattc
aataaaaatatgcgggcacacgcacttaaaaagaaatttacgttgaacgagtataccttg
aaacatctaacattggaagggttaccagggaatgctgaattaatcacaagtgaagaggat
atcttcagtaaacttggacttccatacaaaaaaccggaagagaggaattcataa

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