Neodiprion pinetum (white pine sawfly): 124220675
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Entry
124220675 CDS
T08966
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03083
Polycomb repressive complex
npt04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124220675
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124220675
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npt01009
]
124220675
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npt03036
]
124220675
03029 Mitochondrial biogenesis [BR:
npt03029
]
124220675
Protein phosphatases and associated proteins [BR:
npt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124220675
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
124220675
HMT complexes
COMPASS/SET1 complex
124220675
MLL-HCF complex
124220675
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124220675
Mitochondrial biogenesis [BR:
npt03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124220675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
124220675
NCBI-ProteinID:
XP_046485878
EnsemblRapid:
LOC124220675
LinkDB
All DBs
Position
5:35338649..35346092
Genome browser
AA seq
1575 aa
AA seq
DB search
MAAPMLKWKRITNPTGPQPRPRHGHRAVALKDLMVVFGGGNEGIVDELHVFNTATNQWFV
PSTKGDIPPGCAAYGFVVDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKQE
QPPCPRLGHSFTLIGNRIFLFGGLANDSDDPKNNIPRYLNDLYTLELLGNGVTAWDVPQT
HGNSPPPRESHTGVAYADRTTGKSCLVIYGGMSGCRLGDLWFLDIDTMTWNKPLVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVAVHSRLYVWSGRDGYRKAWNNQVRVCCKDLWYLEVKKPPSPSRV
QLVRASTQSLEVSWAATPSAQYYILQIQKYDMPPTTGTFPAAAAPVSAPTAAPVPVAAAV
PAPATVSSPQIPPVVTPVPSTPPIVRQQAPSQTPVRIQTAVQQSPGQKTIQTPVMAKQGS
PMTPRVTGNLIRIRSPLVTTVTPTTDQGASPGTTSASQSPTTAMSGIQALAAAAAATQKI
SMNNVQILPQPGNTIRMKNMQPGQQIRFAAPGATVLRTASPQQSKQIILQKPGQNITGQP
QIVHLLKAGQGMVAAVPKVSLIQGKTVQTAGSKPLNQGPTILRLVNPNTVAGSKVLTTVK
TSNLVAMSKGQSISGKQTIMITKPGGNGGLVGRTNQIIVVTTGSGLRAVQAVTTSQAGSG
QPGNLSTPVNVLPLSATNHVTNQQGVKMIVVSSGAMGGGTAGKPITITVPGQGGVPKTVT
IATKGNQQTLFNPTKNQIVAVPQMQKTPEAVTVSGKPVTLQMSSGIGTKTVTLMPSSSSI
VTTAGTSEIIDTSKMIFVPSQKQPSASLASTSDGPATTDAALAALAAEAGLIDPVQESSG
GLSFMVSADETGAVDGKGDSCNGNEAAVLASQLGSGEPLQVDNDGNFIIPQVDGPADDLM
EDGEGGGEKEETAATENEPETNEPTEPHPENDSNEAEQHTDSVTADVKLRLQEAVPEDSS
KDPQLDTETSKTPPTSAEPLSTELDATTNSENPEAEIKLEGTEESEENSEQQEQLPNESA
ETEANLPAEDINMKTEDVSLPLDEKILESEGEADNSQDEQNSGKDISNEQHQLEAISMSV
DQSDSDNVSQADSQPAVDDATSQDSQTSQDDIDRKKVDDEPESESLRLNLENPLSPENIK
AKDEPMETESEFLMASKTPIPSPTTAAPTILPKSEPQESQDEPMNEDEDDAVSEPSPIAT
KPSTATNVTTNGIAPTVKRPVPVAILKNEPKDEKDATPTSGDSTALTTLATAALGSAGQA
VKVKAEMLRFQTEEEKKDADWYDVGVIKGTTFTVQHYYLPGDEPLNTSQPLPADVFKGRT
KIFLEPGTAYKFRVAAVNSCGQSGWSEVSAFKTCLPGFPGAPSAIKISKSAEGAQLSWEP
PPSNLGPILEYSVYLAVRSASAVSNSAGEATTVATTPTQLAFIRVYCGPTNACSVPNSSL
SAAHVDTTTKPAIIFRIAARNDKGYGPATQVRWLQDPTTAVKSNPQLKRPVADARPQVNS
PQKKFKTDTGTENFS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatgttaaagtggaaacgaatcacaaatccgaccgggcctcagccaaga
ccgagacatgggcatcgggcggtcgctcttaaagacctcatggtcgtcttcggcggtggt
aacgagggaattgttgacgaactccacgtattcaatacagcaacaaaccaatggtttgtt
ccatcgacgaagggagatatacctcccggttgtgctgcctatgggttcgtggtggatggg
acccgaattttggtattcggtggtatggtagaatatggaaagtattccaacgaattatat
gagctccaggctagtagatgggagtggaagcgattgaaaccaaaaccacccaaacaggaa
caaccaccgtgcccgcgactgggtcacagcttcacactgatcggcaacagaatattctta
tttggaggattggcaaacgacagtgatgatcctaagaataatattccaagatatttgaat
gatctgtatactctggagttacttggcaatggtgtaacagcatgggatgtaccacaaact
catggaaactcaccgccgccaagagaatcgcacactggtgtagcttacgcagatcgcaca
actgggaaatcatgtctagttatatatgggggaatgagcgggtgcagactgggggatctg
tggtttttggacatagacacaatgacttggaacaagccattagtccacgggccgacgcca
ctacctcgctctctgcatactgctactttgatcgggcatcgaatgtatgtctttggtggt
tgggtaccactggtcgttgacgacgtcaaggtagcaacccacgagaaggaatggaaatgc
acaagcacattggcatgcctaaatttagaaacattaacgtgggaacaattgaccgtcgat
tcactggaagaaaatgtgccgagagccagagcaggccattgtgctgtcgcagtccatagt
cgtctatacgtttggtcgggtagagacggatatcgcaaagcttggaacaaccaggttagg
gtatgctgtaaagatttgtggtacttggaagttaagaaaccaccatctccgtccagagtg
caattggttcgagcttcgactcagtccctagaagttagttgggccgccacaccttctgct
caatactacatcttgcaaatacagaaatatgatatgccaccaacaacgggtactttccca
gcagctgcagctcctgttagcgcgcctacagctgctcctgttccggttgcggcagccgtt
ccggcgcctgctactgtatcatctccacagataccaccagtggtcacgccagttccttcc
accccaccaatcgtccggcagcaagcaccatcccagacacctgtacgaattcaaacggct
gtgcaacaaagtccggggcaaaagacaatccaaactccagttatggcaaaacaaggaagt
ccaatgactccaagagtcactgggaatcttatccgcattcgttcaccgcttgttacaact
gtaactcccacaacggatcagggagcctcacctggcacaacttctgccagtcaatctccg
accaccgcaatgtccggcatacaagctttagctgctgcagctgccgcaacgcaaaagatc
agcatgaacaatgtgcaaatacttccacaacctggcaacaccattagaatgaaaaacatg
cagcctggtcagcaaatacgatttgctgcaccaggagcaacggtattaaggactgcctca
ccacagcagagcaaacagataatcctccaaaaaccaggacaaaacataactgggcagcca
caaattgttcacctcctcaaagccggacagggaatggtcgcggcagtaccaaaagttagt
ttaattcaaggaaaaaccgtgcaaacggcaggatcaaagcctcttaatcagggaccaaca
attcttagattggttaatcccaacactgtggctggctcaaaggttcttacgacagtaaaa
acttcgaatttagttgcaatgagcaaaggacaaagtatttccggaaaacagactatcatg
attactaaacctggcgggaatggcgggctggttggcagaaccaaccagattattgtcgtc
accactggctcaggtctgagagctgttcaggctgttacaacctctcaggccggctctggc
caacctggaaacctaagcacaccagttaacgtacttcctttatcagcgacaaatcatgta
accaatcagcaaggtgttaaaatgattgttgtatcatctggtgccatgggtggtgggact
gctgggaagcctatcaccataacggtacctggccaagggggagtaccaaagactgttaca
attgctacaaaaggaaatcaacagacactcttcaatccaacgaaaaatcaaattgtcgca
gttccacaaatgcaaaaaacaccagaggctgttaccgtttctggtaaacctgtaacgttg
caaatgtccagcggcattggtaccaaaactgtcactctgatgcctagcagcagctcgatt
gtgaccactgctggaacatcagaaatcatcgatacgagcaaaatgatttttgtaccctca
caaaaacaaccatcagcctcgctggcttcaacatctgatggtccagcaacgactgatgct
gcgctagcagctctagccgcagaggctggattgattgatcctgttcaagaatcctctgga
ggtttatcgttcatggtatctgcagatgagactggagcggtagatggcaagggggacagt
tgtaacgggaatgaagcagctgttttagcgtcacaacttgggtctggggagccactacaa
gttgacaacgatgggaactttattatcccccaagttgatggtcctgctgatgatttaatg
gaagatggagaggggggaggagaaaaagaagaaacagcagcaacagaaaatgaacctgaa
acgaatgagcccaccgaaccacaccccgaaaatgattccaatgaagctgaacagcatacg
gattctgttacagccgacgtaaagctacggcttcaagaagctgtacctgaagatagtagt
aaggatccacaactggacactgaaacttcaaagactccaccaacttctgcagaacctctt
tcaacagaactggatgcaacaacgaattcagaaaatccggaagctgagataaaacttgag
ggaactgaggagtctgaggagaatagtgaacaacaggaacagttaccaaacgaaagtgca
gaaactgaggctaacctaccagctgaggatataaatatgaaaacagaagacgtaagcctg
cctttagatgaaaaaattcttgaatcagaaggggaagcagacaattctcaagacgaacaa
aattctggaaaagacattagcaatgaacaacatcagcttgaagctatcagtatgtcggta
gatcagtcggattcagacaatgtttcgcaagcagattcacagcctgctgtagatgacgca
acatctcaggattcgcagacatcccaggatgacattgatcggaaaaaagtggatgacgaa
cctgaaagtgaatcacttagattaaatttggagaatcctttatcaccagaaaatatcaag
gccaaggatgagccaatggaaactgaatcggaatttttaatggcatccaagactcctatt
ccttccccgacgaccgccgctcctacaattttaccaaaatcagagccacaagagtcacag
gacgaaccaatgaatgaagacgaagatgatgcagtgtctgagccttcgccaattgctaca
aaaccatctaccgccacaaatgttacaacaaatggcattgccccaactgttaagaggcca
gtaccagtggcaattttgaaaaatgaacccaaagatgaaaaggatgctacacctacaagt
ggtgactcgactgctcttactactttggctactgcagcgttaggctctgctggacaagca
gtcaaagtcaaagctgaaatgttacgtttccagactgaagaagaaaagaaggatgccgac
tggtacgatgtcggagtgataaagggaacaacttttacagtccagcattactatttgcct
ggggatgagcccctaaatacatcccaacccctgccagcggatgtatttaaaggacgtacg
aaaatcttccttgaacctggcaccgcatacaagtttagagttgctgctgtgaatagctgt
ggtcaaagtggttggagtgaggtgtccgcattcaagacttgtctgcctggttttccgggt
gcgcctagcgccataaaaatatcaaagtctgcggaaggagctcagctatcttgggaacca
ccgccaagtaacttgggtccgatactcgagtactcagtttacttggcagtgagaagtgcc
agtgctgtttcaaacagcgctggagaagccaccactgttgctacaacgcctacacagctt
gcgttcatcagagtctattgcggccctactaatgcctgttccgtacctaacagttcgctg
agtgctgctcacgtcgatacgacgactaaaccagcgattatatttagaatagctgcgcgc
aatgataaggggtatggaccagcgacgcaagtcaggtggctgcaagatccaaccactgca
gttaagagtaatcctcaacttaaaaggccagtcgcagacgcacgtcctcaagttaattct
cctcagaagaaattcaagacagataccggaaccgaaaatttctcgtga
DBGET
integrated database retrieval system