Neodiprion pinetum (white pine sawfly): 124221014
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Entry
124221014 CDS
T08966
Symbol
Bap170
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124221014 (Bap170)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npt03000
]
124221014 (Bap170)
03021 Transcription machinery [BR:
npt03021
]
124221014 (Bap170)
03036 Chromosome and associated proteins [BR:
npt03036
]
124221014 (Bap170)
Transcription factors [BR:
npt03000
]
Eukaryotic type
Helix-turn-helix
ARID
124221014 (Bap170)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124221014 (Bap170)
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
124221014 (Bap170)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
124221014
NCBI-ProteinID:
XP_046486547
LinkDB
All DBs
Position
6:complement(5535992..5573977)
Genome browser
AA seq
1817 aa
AA seq
DB search
MAKFLNKDPVTYQRERDGFIKGLHHFHETRGTPFRRPPKISGNEIDLYLLYVLVTAHGGW
IKVNSRNEWTSLCEQFHLPTECVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDEDEDS
RHRKWSARALHSVPLTYNHHQHNVAESLRDYNGLSANLYKPSNYDKLALSLLSPLPNEQD
FAINVCTLLSNEGKHSLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINSF
WSDVIDTQDVLDLTDERDFMKKAINTPKTFSRRKILEKEKQNKLIQAENEENVTPMEVDE
VPTECSRLDTAQTEREESESCRYQNQNQNQNSIKFDEEDKDLFCVGRTLGTQDPYGQRIL
QIASILRNLSFTPENILILGRNRCFLRFVLLCVSTRWSNLHQLGFDMLGNVANEILLKEA
GHRITNVMLSCVSRGIDSPDRFIVISCLEVLNKISQQDSNEEIITLGLDDSAYEIICRFL
ALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRV
VETVSTITVPATVSGQSAAVTPAAPVQVVASSVPSVPTTITATTAPVSPAPSRPTTPASV
NSKQTSHKAIEASNTIQQQHAHQQIIQENEQFALSWLKATFEHSTGVKIEQEELYKKYLG
CCTKIGRRGVIAPLHFPRCVRSVFGGTVGPNPIKGESTGTQYYEGIKVRSVPLTVSFSSQ
TLPASNVIHPIQATNTTPVKVLPTQQRTLKTISPAPDSTALENSITGAQRTPAPASPILK
AQLSAPPKPPSTIPNQPQIPVTKVDSKSQVSVSHPHLSQALLASGSQLQQQHQSQVQVAM
KDDPRSGATSSSIIKSLLATKVTISGDCMPSAAASCVSAPSACVINTTTSIASSISANQL
ITSNQVAQRQQQQRLLQAQLTGVIQPAAPTATPAVASPKIISSNKLKSTTAATPAKKFQR
INGAKVIIPNNCDKADVNDSENINQVVTSTTVISNPTENHISSTVKVCRPPPLVPLSGGN
KTNHRTICTSLAEDSDSTNNSLASSSGIGGSRDCSGVGAEEENSLTSFEGILLNGAPSNL
DIDAQEDGSSKDSSSVSSKDKPLQSMMLADLLERKVDKEPIMNGVLGKNSINEKGMDLVE
NHIEKVLKESPTDVKVKTEVDENDVLQTEGSEETLIEAPRGIKRSASEPDEIESKKPKYS
NGTRSPEPGVDLKTVESTVSSLKSEEPDDDKDSEKATVSSTAANLYAALAADCIEDEIDL
VDDHAILVKDEPVVKEEPQVLLNQSEQQQPLHQQLQQTQTQVQTQVQTQVQTQVQTQMQT
QTQTQTPQQQQQHHHQQHQHQHHQQQLIVAAPRQIVVQQAIQSNNQVIIPTNTVKGRQPQ
QPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQSQTALVQGQAQTVLVAQTTQQQGTGAKTI
IILQPQSAAQPSSQKMVAVTPQGQQVVVTQVPRPILQSPALSNIPPPLVPTSATIPQASI
IVNSSVAQANTNAVTVAIPAVAQQGSITTSVPSRVVTPTPASTPPPTRPTTPHQAAATHG
LAVKQSLKITKTTNSSTSTETDSKPSTSQHPVETKTITIKIDPNAFLCEWRGCLRQFKTA
HEVYLHVCEAHCPIGGEEILCLWASCDGLKRRRFSLMTHLYDRHCNSEAMALRRKQLTVT
GKTEISTSTPATPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPSKPAAATSSTSSPRPG
QNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGVALSNVESSRT
IAQVLYDMNDQSSSSHR
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattcctcaacaaggaccctgtcacctatcagcgggagcgtgacgggttcatc
aagggacttcatcattttcacgagactcgcggaacacccttcaggaggccaccgaaaatc
agcgggaacgagatagacttgtacttgttatacgtgctggttaccgcccacggaggatgg
atcaaggtaaactcgaggaacgaatggacgtcactttgcgaacagtttcacctaccaacc
gaatgcgtgaacagcggtgtcggcctcaaacaaatatacctaagatacctagacaggtac
gaaaaggttcacttcctcggtgaagatgggcagcaggctgacgacgaggatgaagactcg
agacaccggaaatggtcagcgagggcgcttcactcggtacctttgacctacaatcatcat
cagcacaacgttgccgaatccctgcgggattacaacggtctctcggcaaacttatacaag
ccgtctaactacgacaagcttgctctttcgctgctctcgccgctaccgaacgaacaagat
tttgcgataaatgtttgcaccttgctctcgaacgagggtaaacactcgcttcgtcttgac
aagtatccacggcttgttaatatactattggcacacgctggagtattcgattctcctggc
actcgacagcttttcatcgaagtctattcgcgggtcaggaattactccatcaactcattt
tggtctgatgttatcgatacgcaagacgtcctggacctgacggatgagagagactttatg
aaaaaagccatcaatacgccaaagactttctcgaggcggaaaattcttgaaaaagaaaaa
cagaacaagctcatacaggcggaaaatgaggaaaatgttacgcctatggaagtcgatgag
gtaccaacggaatgctcgcggttggataccgcgcaaaccgaaagggaagagagcgaaagt
tgtcgatatcagaatcagaatcagaatcagaattcgataaagttcgacgaggaggacaaa
gacttgttttgtgtgggtcgaacgttagggacacaggacccttacggccaacgcatactt
cagatagcttccattctaaggaacttgagctttacccccgaaaacatattgattttaggg
aggaatagatgtttcctaagatttgtactcctatgcgtcagtaccaggtggagcaatctg
catcagcttggttttgacatgttaggcaatgttgctaatgaaattctactaaaagaagct
ggtcatcgaataaccaatgtcatgttgtcctgcgtgtcacgaggcatcgactcacctgac
agatttattgtcatatcctgccttgaggtgctgaacaaaatcagccagcaagatagtaat
gaagaaattatcactctcggcctagacgatagcgcctacgaaataatatgcaggtttcta
gctctgagtgacattgccttgcttgtttatactttggagtgtctctacgcgctgacttct
ttgggtgaacgtccttgtacaagcgtcgcgcgggtacgcggggctatagatacactagtt
gctctggtcacagtggaggcgcaaagctacggaccaaaagcttgcattttgatgagagtc
gtggagacggtatcgactataacagttccagcaacagttagtggacaaagcgctgctgta
acaccagcggcacctgttcaggttgtagcttcatctgtaccatctgtaccgacgacaatc
actgccacgacagcccctgttagtccagctccctcgaggcccaccactccagctagcgtt
aatagcaaacaaacttcgcataaagcgatagaagcctcgaatacgatacagcagcaacac
gctcaccagcaaattattcaagaaaacgagcagttcgcccttagttggcttaaggctaca
ttcgaacactcgacgggagtgaaaattgaacaggaagaactatataaaaagtaccttgga
tgctgtacaaagattggaagacgaggtgtaatcgcgccgcttcattttcccagatgtgtt
agatccgtttttggcggaaccgttggaccaaatccgataaagggagagtcaacgggaacc
cagtactacgaaggcatcaaagttcgctccgtaccactgacagtgtctttttcgagccaa
accttaccagcgagtaatgtgattcatccgatccaggcgaccaacacaactccagtaaag
gtgcttcccacacaacagcgaacactcaagaccataagtcctgctcccgatagcacagcc
ctagaaaattccataactggtgcacagagaaccccggcccccgcgtctcccattctcaaa
gcgcagttatcagccccaccaaaaccaccctctacgattcccaatcaaccccagattcca
gtcaccaaggttgactccaaaagtcaggtgtcagtgtcgcacccccacctgagtcaagcc
ctgctggccagtggttctcagttgcaacaacagcaccaatcccaagttcaagtagcgatg
aaggacgatcctcgaagcggtgcaacttcaagttcaataataaaaagcctcttggctaca
aaggtaacgatcagcggcgactgcatgcccagtgccgctgccagttgtgtgtctgcccct
tctgcctgcgtaataaacactaccactagcatcgcatccagcatcagtgccaaccagcta
ataaccagcaaccaggttgcccagcgtcagcaacaacaacgactacttcaggctcaattg
acaggagtcattcagcctgcagcgcctactgctacaccagcagtagcttcacctaaaata
atctcaagtaataagctgaaatctactactgctgccactcctgcaaaaaaattccaaagg
attaatggagctaaggttatcatccccaacaattgtgacaaggctgacgtaaatgactct
gagaacatcaatcaagtggtaacgtcaacgacagtgatttcgaatccaacggaaaatcac
atatcctccacagttaaagtctgtcggccacctcctctagttccattgagtggaggaaat
aaaactaatcatcgaactatctgtacatcattagcagaagactcagattctactaataat
tcgctcgcatctagtagcggaattggtggaagtagggattgttctggtgttggcgctgag
gaagagaactcattaactagttttgagggtatccttttgaatggtgcacccagtaacttg
gatatcgatgcccaagaggatggatcttcgaaagattcatcaagcgtcagctccaaagac
aaacctctgcaaagtatgatgctggcagatctattggagagaaaagttgacaaagaacca
attatgaacggcgttttagggaaaaattcaataaacgagaagggaatggaccttgtagaa
aatcatattgaaaaagtgttgaaagaatctccaacggacgtgaaagtaaaaaccgaagta
gacgaaaatgacgtattgcaaacggaagggtctgaagaaacgcttatcgaagcaccaagg
ggtataaagagatcagccagtgagccagatgaaattgaatcaaagaaacctaaatattcc
aatggtacgagatctccagaacctggtgttgatttgaaaaccgttgaatctacagtttca
agcctgaaatcagaagaaccagatgatgacaaagatagtgaaaaagcaactgtatcctca
acggccgcaaacctgtatgctgcgctagctgcagactgcattgaagacgaaattgaccta
gtagatgatcatgcaatcctagtgaaagacgaaccagttgtaaaagaagagccacaagtg
ttgttaaaccaatctgaacaacaacaaccgctacatcagcaactccagcaaactcaaaca
caagttcaaacacaagtgcaaacacaagtgcaaacgcaagtgcaaacacaaatgcaaaca
caaactcaaacgcaaacaccacaacagcagcagcaacaccatcaccaacaacatcagcat
caacaccatcaacaacagctgatcgtagctgcacctagacaaatagtcgtccaacaagct
attcagtcaaataatcaagtcatcattccaacaaatacagttaaagggagacaacctcaa
cagccccaagtccttttgcaacaaggagcaggaggtcagttacagtatgttgtttctgga
ggtgttcctggacaaaattatgtactcgcccagtctcagactgccctggttcaaggacag
gcccaaacagtcttagtggctcaaacgacgcagcaacaaggaactggcgcaaaaactata
attattttacaaccacagtctgcagcccaaccaagttcgcagaaaatggttgcagttaca
ccgcaagggcaacaagttgtcgtgacacaggtcccaagaccaattttgcagagcccagcc
ttgagtaatatccctccgcctttggtgccgacttcggcaacaatccctcaagcttccatt
atagtaaatagctccgttgctcaggcgaatacgaacgcggtaacagtagctattccagcc
gtagctcagcaaggatcgataactactagcgtaccgtcgagagtggttacccccacacct
gcatccacccctccgccaaccagacccactacaccgcatcaggcagctgccactcatggg
cttgctgttaagcaatctctcaagataacgaagactacgaactcctcaacatcaaccgaa
acggattctaaaccttcgacgagtcaacatcccgtcgaaactaagaccatcacaatcaaa
attgatcctaatgcttttttgtgcgaatggcgaggttgtttaaggcaattcaaaacggcc
catgaagtttaccttcacgtatgcgaagcgcattgtccaattggaggtgaagagattttg
tgtctttgggctagctgtgatggattgaagagacgtagattttctctgatgactcatctg
tatgacagacactgcaactcagaggctatggcactaagaagaaagcaattgactgtgact
ggtaaaactgaaatatcaacatcaacaccagcgacaccacaccatcctggctatgcaccc
aatgccgcatttcatgcgatcaaaaggcatgccctggaatttgtcaatcccaaggagtta
atgcagaggccatccaagcccgctgcagccacttcgagcacttcttctcccagaccaggg
caaaatcctccaccggaacaggatgacaacgaaggcccagtgaccaaaagtattcggctg
acggcagctttgattctcagaaacctagtcatttactccgcacatggaagaaggcatctc
agggcatacgaacctcatctggcaggagtggcgctaagcaatgttgaatcatccagaaca
atagcacaagtgttatatgacatgaacgatcagagcagcagtagtcacaggtga
DBGET
integrated database retrieval system
