Neodiprion pinetum (white pine sawfly): 124221362
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Entry
124221362 CDS
T08966
Symbol
betaCOP
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124221362 (betaCOP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npt04147
]
124221362 (betaCOP)
Membrane trafficking [BR:
npt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124221362 (betaCOP)
Exosome [BR:
npt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124221362 (betaCOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
HEAT_EZ
Cnd1
Coatomer_g_Cpla
MMS19_N
Motif
Other DBs
NCBI-GeneID:
124221362
NCBI-ProteinID:
XP_046487256
LinkDB
All DBs
Position
6:complement(2357436..2362247)
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AA seq
961 aa
AA seq
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MSSIAEQPCYTLINIPMDSEPINELQLKLDLEKGDTKTKIEALKRTIHMIISGERLPGLL
MTIIRFVLPLQDHMVKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFVRGS
TLRFLCKLKEPELLEPLMPAIIACLEHRHSYVRRNAVLAIFTIYRNFEFLIPDAPELIAK
YLDGEQDMSCRRNAFLMLLHADQSRALSYLAACLDQVPSFGDILQLVIVELIYKVCHANP
SERARFIRCIYSLLNSPSAAVRYEAAGTLVTLSSAPTAIRAAAASYVELVVKESDNNVKL
IVLDRLIAMKDSPAHERVLQDLVMDVLRVLGSPAFEVRTKTLALAMDLVSNRTIDEMVQL
LKKEVMRTAGGEHEDAGRYRRLLVRTLHACSIKFPDVAATVIPVLTDFLSENNEAAATDV
LIFVREAIQRFEPLRPLIIEKLLEVFPQIRSVKVHRAALWILGEYAVSKEDIEAVMSRIR
AALGELPLVEAENKRAAGDKPAEDGVAPTSAANPAQLVTSDGTYASQSAFSTASTGKKEE
KRPALVQYMMDGDFFIGASLATTLAKLVLRYKALENDATKSNRMQAEAMLIMSGVLQLGR
SGLPTKAMTHDDAERLTVCLRSLACPTPIIQKVFTEGCRDALSRMFAAKAEEDSQTQKAK
EKPGSIVQVDDAIQFLQLSRNLDLTGGAGDVFEQSLSVAVAGRPGAAGDAPAPSALSKVT
QLTGFSDPVYAEALVHVNQYDIVLDVLVVNQTEDTLQNCTLELATMGDLKLVERPQPIVL
APRDFASIKANVKVASTENGIIFGNIVYDVSGAGSDRSVVVLNDIHIDIMDYIVPATCTD
SDFRRMWSEFEWENKVSVNTTLSDLREYLAHLLKSTNMRCLTPEKALSGQCGFMAANMYA
KSIFGEDALANLSIEKPMHKQDAPVVGHIRIRAKSQGMALSLGDKINSTQKGPQTKLVQA
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtattgcagaacagccatgctacacactgataaatattccaatggattcggag
ccaatcaacgagctccagctgaagctcgatctggagaagggtgacaccaaaactaaaatt
gaagcactcaagagaacgatacacatgattatcagtggcgaaaggctccctgggctgtta
atgaccattataagattcgtgctaccattgcaagaccatatggttaaaaaattgctactc
attttttgggaaatcgtaccaaaaacttctccagatggcaaactacttcaggaaatgatt
ctcgtctgcgatgcatacagaaaagacctgcagcatccaaacgaatttgtcaggggatcc
actctgagatttctctgcaaactcaaggagcctgaacttctggaacctctgatgcctgcg
atcatagcctgtttggagcatcggcattcgtacgttaggcgaaatgcagttttagccata
ttcacaatataccgtaattttgagttcctcataccggacgctccagagttaatcgcaaaa
tacttggacggtgagcaggatatgtcctgtagacgaaatgcattcctcatgctgctccat
gctgatcagagcagagctctttcctacctagctgcttgtcttgaccaagttccaagcttt
ggcgacatccttcagctggttatcgtcgaactgatttacaaggtgtgccatgcaaatcca
tcagagagagctagatttatccgttgcatctatagtttgctaaactcaccaagcgcggct
gttcggtatgaagctgctggtacactggttaccctgtctagtgccccaacagcaatacga
gctgctgctgcatcctatgtagaactggtagttaaagagagtgacaataatgtgaagttg
attgttctggatcgacttattgccatgaaggacagccctgcccatgaaagagtactacag
gatcttgtaatggatgtgcttagagttttgggatctccggcgtttgaagtcaggacaaaa
acccttgccttggcaatggatctagtatcaaatcgaaccattgacgaaatggtgcagctg
cttaagaaagaagtgatgcggactgctggtggcgaacacgaagatgctggtagataccgt
cggctcctggttaggaccctacacgcctgttcaatcaagttcccggatgttgcagcaact
gttataccagttctaactgattttctctctgaaaataacgaagctgcagccactgacgtt
ctcattttcgttcgtgaagccatccaacgatttgagccactcaggccactcattatagaa
aagctattagaagtatttccacaaattcggtcggtcaaagtacaccgtgcagcactttgg
atccttggagagtatgcagtttcaaaagaagacatcgaagctgtaatgagtcgcattagg
gccgcgcttggagagctacctttagtcgaggcagagaacaagagggcggctggtgacaag
ccggccgaagacggcgttgccccaacttcagcagcaaacccggctcagcttgtaacctcg
gatggaacgtatgctagccagagtgcgtttagcacagcatcgactggtaaaaaagaagaa
aaacgtccagctctggtccagtacatgatggatggtgactttttcattggtgcttccctt
gctacaacccttgctaagcttgtactgcgctacaaagctctcgagaacgatgctacaaag
agcaacaggatgcaagcagaagcgatgctcattatgtccggtgtattgcagctcggtaga
tccgggcttccgactaaagctatgacccacgacgatgctgaacgactgaccgtgtgcctg
aggtcactagcctgtcctacacccatcattcaaaaggtcttcacagagggctgtagagac
gccctcagcagaatgttcgctgctaaagccgaggaagactcgcaaactcaaaaggcaaag
gaaaagccgggcagcatcgtacaagttgatgatgcaatccaattcctgcaactcagccgt
aatttggatctcactggaggcgcgggagacgtcttcgagcaaagtcttagcgtggcggtt
gctggcaggccaggcgcggcaggagacgcaccggcacctagcgccttgagtaaagtaacg
cagctcacaggattctccgatcccgtatacgcagaagctctggtccacgtcaaccagtac
gacattgtcctcgacgttcttgttgtcaatcagacggaagacaccctccaaaactgcacg
ttagaactcgcgacaatgggtgaccttaaactcgtagaaagaccgcaacccatagttctg
gcgccaagagactttgccagtatcaaggcgaacgtaaaggtcgcgtcgacggaaaacggc
attatcttcggaaacattgtatacgacgtgtcaggcgccggttcggacaggagcgtggta
gtcctgaatgatattcacatagacataatggactacatagtaccagcaacatgtaccgac
agtgatttcaggcgtatgtggtcagagtttgaatgggagaacaaggtgtcggtaaacacg
acattgtcagatctccgagaataccttgcccacctacttaagtcgaccaacatgcgctgt
cttacgcccgaaaaggctctttctggccagtgtggattcatggctgcaaacatgtacgca
aagtcgatatttggcgaagacgcgctcgcaaatttgtcaattgaaaaaccgatgcacaaa
caggatgctccagttgtcggtcacattcgtatcagggctaagagccaaggtatggcgctt
tcattgggcgacaagataaactcgacgcaaaaggggcctcaaactaaactcgtccaagct
gcttga
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