Neodiprion pinetum (white pine sawfly): 124221524
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Entry
124221524 CDS
T08966
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04145
Phagosome
npt04517
IgSF CAM signaling
npt04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124221524
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124221524
09142 Cell motility
04814 Motor proteins
124221524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124221524
03036 Chromosome and associated proteins [BR:
npt03036
]
124221524
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npt04812
]
124221524
04147 Exosome [BR:
npt04147
]
124221524
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124221524
Chromosome and associated proteins [BR:
npt03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
124221524
Cytoskeleton proteins [BR:
npt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
124221524
Exosome [BR:
npt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124221524
Exosomal proteins of other body fluids (saliva and urine)
124221524
Exosomal proteins of colorectal cancer cells
124221524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
124221524
NCBI-ProteinID:
XP_046487589
LinkDB
All DBs
Position
6:complement(21340873..21342886)
Genome browser
AA seq
431 aa
AA seq
DB search
MGNACWELYCLEHGIQQDGTMPSDTVSVSNDCFNTFFNETGSGKMVPRSIMVDLEPTVVD
EVRAGPYRQLYHPEQLITGKEDAANNYARGHYSIGREIIDSVMDRVRRLTDQCTGLQGFF
VFHSFGGGTGSGFTSLLMQKLSDSYGKKSKLEFAIYPAPQVSTAVVEPYNAILTTHTTIE
HSDCAFMVDNEAIYDICRRKLGIERPSYTNLNRLISQVVSSITASLRFDGALNVDLTEFQ
TNLVPYPRIHFPLASYAPIVSADKAFHEGMSVAEITSECFDPSNQMVKCDPREGKYMACC
LLYRGDVVPKDVNAAIATMKGKSTIRFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVS
MLSNTTAIEEAWAKLNQKFDLMFHKRAFVHWYVGEGMEEGEFAEAREDLAALERDYEEVA
LESTTPDAVEY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgcgtgctgggagctgtactgtctcgagcacggaattcagcaggatggcacg
atgccttccgacaccgtctccgtcagcaacgactgcttcaacaccttcttcaacgagacc
ggatccggtaagatggtgccacgctcgataatggtggacctggaaccaacggttgtcgat
gaagttcgcgccggtccttatcggcagctgtatcatccggagcaactgatcaccggcaaa
gaagacgctgcgaacaattacgcccgaggacactactcgattggccgtgagatcatcgat
tccgtgatggatcgagtgcgcaggctgaccgatcaatgcacaggtcttcagggcttcttc
gtatttcactcattcggaggcggcactggctcgggattcacgtctcttctcatgcaaaaa
ctctccgatagctacggcaagaagtcaaaacttgaattcgcaatctatcctgcaccccag
gtatccacggctgttgtggaaccctacaacgcgatactgacgacgcacacgacgatcgag
cattcggactgcgcttttatggtggacaacgaggcgatatacgacatttgccgtagaaag
ttagggatcgagcggccatcctatacgaatttgaacaggctgatcagccaggtggtttcc
tcgatcacagcatcgctgcgtttcgacggtgccctaaacgtggacctgaccgagttccaa
actaacctggtcccctatccccggattcacttccccctggcaagctacgctcctatcgta
tctgcggacaaggctttccacgagggaatgtcagtcgccgagataacatccgaatgtttc
gacccctcgaatcaaatggtcaagtgcgatcctcgcgagggaaagtacatggcctgctgt
cttctttaccgcggcgacgtcgttccgaaggacgttaacgccgccattgccacgatgaag
gggaaaagtacgattcgattcgtcgactggtgtcccacgggattcaaggtcgggataaat
tatcaaccaccgaccgttgtccccggcggagatttggcaaaggttcaacgcgccgtatct
atgctgtcgaacacgacagccatcgaggaggcctgggccaaattgaaccagaaattcgac
cttatgttccacaagagagccttcgtccactggtacgttggtgagggtatggaagagggt
gaattcgctgaggcccgagaagatctcgctgcgttggaaagagactacgaggaagtcgct
ctcgagtctacaacaccggacgccgttgagtactga
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