Neodiprion pinetum (white pine sawfly): 124221682
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Entry
124221682 CDS
T08966
Symbol
kn
Name
(RefSeq) transcription factor collier isoform X2
KO
K09103
early B-cell factor
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npt03000
]
124221682 (kn)
Transcription factors [BR:
npt03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124221682 (kn)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
124221682
NCBI-ProteinID:
XP_046487863
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Position
6:28874703..28941285
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AA seq
549 aa
AA seq
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MRQTLKEEPVPRAWSQPSIADNGTVGVGRAHFEHQPPSNLRKSNFFHFVIALYDRAGQPI
EIERTAFIGFVEKDQETEGQKTNNGIQYRLQLLYANGVRQEQDIFVRLIDSVTKQAIMYE
GQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNA
GNPRDMRRFQVIISTQIGVEGPLLAVSDNMFVHNNSKHGRRAKRLNPGETGEYNSLYQPV
SVASPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPR
HIPGVVEVTLSYKNKQLCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEI
ILKRAADLAEALYSMPRGGNAGITGAPRSPGSGHPPPPPTSTSATAFNSYTGQLAVTVQE
NGSAKWTDDGGSVTTGAGGGGGGSVGGSADAYRQSSSVSPRGGGTGGGYCGSSASTPHSH
STAGSYSAATNPYTVPLPGSPTLYNSPHEQYGIFYSSGDASAFAPVLRPPTSSVPSHWPT
QHHLATAAQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagacccttaaggaggaaccggtgcccagggcttggtcgcagccttccatcgcc
gacaatggaacagtcggtgtcggcagagcccacttcgaacaccagccaccaagcaacctc
agaaagagtaatttttttcattttgttatcgcgctctacgaccgggcgggacagccaatc
gaaattgagaggacggccttcatcggattcgtcgagaaggatcaggaaaccgagggacag
aagacgaataatgggatccagtaccggcttcagctgctctacgcaaatggcgtgaggcaa
gaacaggacatcttcgtcaggctgatcgactccgtcaccaagcaggccatcatgtacgag
ggacaggacaagaacccggagatgtgcagggtgctgctgacccacgaagtgatgtgcagt
cggtgctgcgacaagaagagctgcggaaaccgaaacgaaacaccgagcgatccggtgata
atcgatcggtttttcctcaagttctttctaaagtgcaaccagaactgcctcaagaacgcc
gggaacccgagagacatgaggcgatttcaggtgatcatctcgacccaaatcggagtcgaa
gggcctctcctagctgtttcggacaatatgtttgtccacaacaacagtaaacacggccgg
agggcgaaacgcctcaacccgggcgagaccggcgagtacaacagcctttatcaacccgtg
tccgttgctagcccatgcatcaaggcgatatcgcccagcgaaggatggacgtccggcggt
tccaccgtcatcatcgtcggtgacaacttcttcgacggactgcaggtcgtcttcgggacc
atgctcgtctggagtgagctgatcacaccgcacgccatcagggtccagacgccaccacgg
cacataccgggagtcgtcgaagtgacgctatcttataagaacaaacaactttgcaaagga
gcaccgggccggtttgtctacgtttcactgaacgaaccaacgatcgactacgggttccag
aggttgcagaaactcatccccaggcatcccggtgacccggaaaagcttccgaaggaaata
atactgaagagggcggctgacctggcagaagctttgtacagcatgccgaggggtgggaac
gcgggcatcaccggggcgcccagaagcccgggttccggtcatcctccgccaccgccaacg
tccacctccgccacagccttcaactcttatacaggccagctagccgtcaccgtgcaagaa
aacggtagcgctaaatggaccgacgacggtggctcggtgacgacgggagccgggggaggt
ggcggcggcagcgtcgggggcagtgcggacgcctaccggcagagcagcagcgtcagcccc
cgcgggggtggcactggcggtggctactgtgggagcagcgcgagcaccccacacagtcac
agtaccgccggaagctactcagccgctaccaacccctacacggttcccctacccggaagt
ccgaccctctacaactccccgcacgaacagtacggcattttctattcgtccggcgacgcc
agcgctttcgccccggtcctgagacccccgacttcctcggtcccgtcgcactggcccacc
cagcatcacctcgctaccgcagcacagtaa
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