Neodiprion pinetum (white pine sawfly): 124221925
Help
Entry
124221925 CDS
T08966
Symbol
beta-Spec
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04517
IgSF CAM signaling
npt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124221925 (beta-Spec)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124221925 (beta-Spec)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npt04812
]
124221925 (beta-Spec)
Cytoskeleton proteins [BR:
npt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124221925 (beta-Spec)
Intermediate filaments
Intermediate filament-binding proteins
124221925 (beta-Spec)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
124221925
NCBI-ProteinID:
XP_046488318
LinkDB
All DBs
Position
6:complement(27054674..27082211)
Genome browser
AA seq
2828 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERESVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIHFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
HDYESLTSDLLRWIEGTIEALGDRRFANSLVGVQTQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIDRINARKDNVLRLWNYLLELLKARRVRLECSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEQGEDYRPC
DPTIIIERVQQLEDAYAELVRLAVERRARLEESRNLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELISQHHFGSDRIKERLQEILG
MWNHLLDLAAFRRKRLEEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIEQLHQQASQLGEHDSKSPKVLERLASIDSRYKELLELAKLRKQR
LLDALSLYKLFSESDGVEQWIGEKNRMLETMVPAKDIEDVEIMKHRYDGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAEGKREALNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLNALEKEAQSIEQ
EHPDEAAVIRERITQIHTMWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQTWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYQKMMDYGERLTSEAGDGDTQYMFLRE
RLNALKMGWEELHQMWANRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILTKDETPTNFE
QAENMIKRHEAFMTTLEANDDKINSVVQFAGRLVEEGHFAADKVKKKADAINDRRNANHE
KANQVMDKLKDQLQLQMFLQDREELVEWVQEKHITAQDETYRSAKTVHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQLKPELAEIIKPKVEELCDQFEELETTTKDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKARQVTELDKQ
AEHLQRTVPDEKMEEIKCKKEKVAQRFEQLKAPLTDRQRQLEKKKEAYQFRRDVEDEKLW
IAEKMPQATSSEYGNSLFNVHMLKKKNQSLRTEIENHEPRINSVCKNGQKLIDEGHEDSA
EFTQRISDLSDKWRELKDAVDNRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYADTIRQLGETARQLINDQHALSDQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHVTLLWERFK
EFARDTETIGSERVAAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
AASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHGNFIQDLFTLQSQVT
QIQDESSKLQASYAGDKAREITNREAEVVAAWNNLQSLCEGRKAKLEDTGDLFRFFNMVR
TLLIWMDDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNLTACLDLGKDLLARN
HYASVQIKEKLLALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDDVENLIKKHEAFEKSAAAQEERFSALQRLTTSECPDKECGLYPPVLEFSHK
LIFTPECPPSSKIPITQPKKYLKSQGEIVRDIILYCDRFIMPDTMQRRECTSTGTKIIYP
NAINYRTDKTKPSKSFLWSSSWNSTSKTSQGSSGSQPVSPYAEFTDVPVFDDEIVTSNER
KTLRRISTISAHKPEFFRLHSTPEIADLTVLNPRKYCVSNSSSDTEYSEIIDTACVPEKR
TKSSTSIDVSHSVMIHNLVDTDNEFNHKHVNVELKTQLVKPTDTQMNEYGLEVYLRDKKS
EKALAEISLNDELSSEDRYSLDLEKSITNIRKLRLEIGAFTDDLIKADLDPSELLILAER
CFCNEDNSIRSFNHLMQVKFNDHDYMSLKSRAMPPKSSNLLTNETSSVRERSKSLLGPKD
KFKKSSNLNKVDPNLSAISDSEKSFPSQDHSFSLDNVTLENNVTQFELRELKRQEQEREE
EERREQEEAAAAEAAKLAKATPVTSPDEPPSDRVDGDGNQSGEQAGEEDGHVALRKPSTR
SPQTQEKPKEVHVQKPARLSTPDVSTPPISPTSPKSQSSYPTTPTTPKGGSGSESGTLRR
KERSRSKSPFRSFRWKKSTKSPSLDRSGVSDDDHSYTEQRSPGDDEFEGTLTRKHEWEST
TKKATNRSWDKLYMVVRGQNLVAYKDQKSYKAAADQPYKGEPPLDLRGASVQVASEYTKK
KHVFRVKSQSGADFLFQAKDDAEMLEWVSVLNQAAQGVSGASTSRAHTLPAPTQAETKRR
SFFTLKKN
NT seq
8487 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtgcgcgggggttgggacccgacgcttcaacaggagatt
gtcgacgagtacgaatacgatggaggaaattccagttcgagactttttgaacgatcccgt
atcaaggctttagctggtgaacgtgaatcggtacagaagaaaacatttcaaaaatgggtg
aattcccatctggtacgatgttcttgtcgtatcggagatctctatgtcgatcttcgcgat
ggaaaaatgcttataaagctgctggaaatattgtcgggcgaacgtttgccacgtcctaca
aaaggaaaaatgcgtatccattgtttggagaatgtagataaggcactgcaatttttgcga
gagcaaagagtccatcttgaaaacatgggatcacacgacatcgtcgatggaaatccaaga
ttaagcttgggattaatttggacaatcattctacgtttccaaattcaagacatcaccata
gaagaaactgataaccaggaaactaaatcagccaaggatgctttgcttttgtggtgtcaa
atgaagactgctggatatcacaatgtaaatgttaggaacttcacaacatcttggcgagac
ggtcttgcgttcaatgccataatacacaaacatcgtccagatttgatccactttgacaag
ctatcgaaatcaaacgcgatctacaatttaaacaatgctttcaatgtcgcagaggataaa
ttaggtctaacaaaattgttagacgcagaggatatttttgttgatcatcctgacgaaaag
tctataataacttatgttgtgacctactatcactacttctcgaaaatgaagcaggagacc
gttcaaggtaaacgaattggtaaagttgtcggaattgccatggagaacgatagaatgatt
cacgattatgaaagtttgacaagtgatttacttagatggatcgaaggaacaattgaagct
ttgggtgatcgtcgttttgctaattctcttgtgggcgttcagactcaactttcacagttt
tccaactaccgtacagtagaaaaaccacctaaatttgtagaaaagggtaacttggaggtg
ctactgtttacactgcaatccaaaatgcgtgccaacaatcagaaaccctacacacccaag
gaaggtaaaatgatttccgatatcaacaaagcctgggagagattagaaaaagctgaacac
gagcgtgaattggcgctcagagaagaattgatacgtcaagaaaaattggagcaattggct
gcaagatttaaccgaaaagccagcatgagagaaacttggctatctgaaaatcaacgactt
gtgtcgcaagacaactttggcttcgatttagcagccgtagaagctgcagctaagaaacac
gaggctatagaaactgatatattcgcttacgaagaacgtgtgcaggcagttatggctgtg
tctcaagagttagaggctgaaaactaccacgatatagaccggatcaatgcccgaaaggac
aatgttctaagattgtggaactaccttctggaattactgaaagcacgaagagtgcggttg
gaatgttcacttcaattacaacagaacttccaagaaatgttgtacattttagacagtatg
gaagaaattaagatgcgattgttaactgatgattatggtaaacatttgatgggcgttgaa
gatcttcttcaaaagcattcacttgttgaggccgacatcaatgtcttaggtgagagagtt
aaggctgtcgtacaacaaagccaaagattcttagaacaaggagaagattatcgtccttgc
gatccaaccattattattgagcgagtgcaacaacttgaagatgcttacgctgaattggtc
cgcctggctgttgagcgtcgagcacggcttgaagaatctcgtaatctttggcaattctat
tgggatatggctgacgaagagaattggatcaaggagaaagagcagattgtttctacgggt
gatattggtcatgacttaactaccattaatttacttttgtccaaacacaaggccttggag
aacgaaatccaatctcacgaaccacaattgatgtcagttgctgcagtgggtgatgaattg
attagtcaacaccatttcggttctgatcgcattaaggaaagattacaagaaatattaggc
atgtggaatcacctgttagacttggcggcgttcagacgcaagcggttagaagaagctgtt
gattatcatcaattatttgctgatgccgacgatatcgatatttggatgctggatactctg
cgattggtatcgtctgaggatgtcggtcgcgatgaagcaaatgtgcaatctttgctgaaa
aaacataaagatgtcactgatgaactgaaaaattacgctacaaccattgaacagctgcat
caacaagcatcgcaacttggagaacacgattctaagtctccaaaggtattagaaagactc
gcctcaattgattcgagatacaaagagcttctggaactggctaaattgcgcaagcaaaga
ttattagatgccttgtctctgtacaagctgttcagcgaatcggatggagttgaacaatgg
atcggagaaaagaacagaatgttggaaactatggttcctgccaaggacattgaagatgtt
gagataatgaaacaccgctacgatggctttgagaaggaaatgaatgccaatgcttctcgc
gttgctgtagttaatcaattggctagacagctactacatgttgaacatccgaactcagag
cagattgttgcacgtcagaatgaattgaatcaaaagtgggccgagctaagagagaaggct
gaaggcaaacgcgaagcactcaactctgcacatggagtacaaaccttccacatcgaatgt
cgtgagaccgtatcttggatcgaagataagaaacgcatcttacagcaaaccgatagctta
gaaatggacttgactggtgtgatgacgctacaacgtcggcttagcggtatggagcgtgac
ttggcagccatacaggcgaaattgaatgcacttgaaaaagaagcgcaatcaattgagcag
gaacatcctgatgaggctgcagtcattcgtgaacgaatcacccaaattcataccatgtgg
gagcaattaactcagatgcttaaagaacgcgatgccaaactcgaagaagctggagattta
catagattcttgcgtgaccttgatcatttccagacttggcttaccaagacccaaacagat
gttgccagcgaagatacacccacaagccttgcagatgctgagaaactgttgacccagcat
cagaatattaaggaagagattgacaactacacggacgattatcagaagatgatggactat
ggcgagaggctaacaagtgaggctggagatggagatacacagtacatgttcttgagagaa
agattgaatgccctgaaaatgggctgggaagaactccaccaaatgtgggcaaatcgtcaa
aatctgttatcgaattcgttgaacttgcaggtctttgaccgtgatgctcgccaagctgaa
gttttgttgtctcagcaagaacatatccttaccaaagatgagactccgacgaactttgaa
caagcagaaaatatgataaaacgccacgaagcatttatgactacattggaagccaatgac
gataagatcaactcggtcgttcaatttgcgggcaggttagttgaggaaggccactttgcg
gcggacaaagtcaagaagaaggcagatgcaataaatgatcgaagaaacgccaatcacgaa
aaagctaatcaagtgatggacaaattgaaggatcaacttcagttgcagatgttcttacag
gatagagaggaactcgttgaatgggtacaggaaaaacacatcactgctcaagatgaaact
tatcgcagtgcaaaaacggttcatagcaaatggacgaggcaccaagcgtttgaagcagaa
attgctagcaataaagatcgtctgcaacaactgcaacaggctgctgatgagttgattcaa
ttgaagcctgaattggctgagatcataaagccgaaagttgaagaattatgtgaccaattt
gaagagctggaaacaacaacaaaagacaaaggagagagactattcgatgctaatcgtgaa
gtcctcatacatcagacttgcgatgatatcgactcgtggatgaatgaattggagaaacag
attgaaagtacagatactggatctgatcttgcctctgtcaatattttgatgcagaaacag
cagatgatagaaactcaaatggctgtgaaggctcgccaagttacagagctcgataaacag
gctgaacatttgcagagaacagtaccagacgagaagatggaagaaataaaatgcaagaag
gagaaagttgcgcaaagatttgaacagcttaaggcaccacttaccgatcgacagcgtcag
ctggagaagaaaaaagaagcgtaccaattcaggcgtgacgttgaggatgagaaattatgg
attgcagaaaaaatgccacaagctaccagttcggaatatggtaattccctcttcaatgtt
catatgttgaagaaaaagaatcaatctctccgtactgaaatcgaaaaccacgaaccaaga
attaattctgtatgtaaaaacggtcagaaattgattgacgagggacacgaagatagtgct
gaattcactcaacgtatctccgatctttcggataaatggcgcgaactgaaagatgcggtt
gacaacaggaataagcatttgttacaaaacgaaaaggcacaacaatacttcttcgacgcc
acggaggctgaatcgtggatgagcgaacaggaattatacatgatggttgaagatcgtggt
aaagacgagatatctgcgcaaaacctaatgaaaaaacacgagtctttggaacatgctgtc
gaagattatgccgataccatccgtcagctaggtgaaacagcaagacaattgataaacgat
cagcatgcattgagtgatcaaattgcagtcaaacaatcccaagttgacaagctatatgca
ggactaaaagatttggctggcgaacgccgtgccaagctagacgaagcccttcaattgttt
atgctaaaccgagaagttgatgatttggagcaatggatagctgagcgagaattagttgca
ggcagtcatgagttaggtcaagattacgatcatgttactttgctctgggaaagattcaag
gaatttgctcgtgacacagagacaataggatcggaaagagtcgcagctgtaaatggaatt
gcagattctttgattgcaacaggacattcggatgcagctacaattgcagaatggaaggat
ggcctgaacgaagtctggcaagatttgctagagcttattgaaacacgaactcaaatgtta
gcagctagccgtgagctacataaatttttccacgactgcaaagatgttcttggaaggatc
ttggaaaaacaaaatgcaatgtctgatgaattgggccgcgacgctggctcagtttcggca
cttcaacgtaaacacggcaactttatccaagacttattcaccttacagtcgcaggtgaca
caaattcaagatgaatcgtctaaacttcaagctagctacgcaggggataaggctagagaa
atcacgaatagagaggccgaagtagtagcagcttggaataatttacaatctttgtgcgaa
ggacgtaaggcaaaattggaagacaccggcgatttgttcagattcttcaacatggttaga
acattactgatttggatggatgatgttgttaggcaaatgaacacttcagagaagccccgt
gatgtatcaggtgtagaactacttatgaataatcatcaaagtttgaaagctgaaatcgac
accagggaagacaatcttactgcttgtcttgacctaggaaaagatctattggcaaggaat
cattacgctagcgtccaaattaaggaaaaactactagcattgactgatcacagaaatgca
ttgttgcaccgctgggaagaaagatgggagaatctgcagctaattcttgaagtttaccaa
tttgccagagatgcagctgtagcagaagcttggcttattgctcaggagccatatctcatg
agccaagaacttgggcatacaatcgacgacgtagaaaatctgatcaagaaacatgaagct
ttcgaaaaatcagctgcagcacaagaagaaagatttagtgctctacaacgactcacaacg
tctgagtgtcctgataaagaatgcggcctatatccaccggtgctggaatttagtcacaaa
ttaatctttactccggaatgtcctccgtcatctaaaatccctataacacaacccaaaaaa
tacctcaaatcccaaggtgagattgtgcgtgacattattttgtactgtgacagatttatc
atgcctgatacgatgcaaagacgtgagtgtacatctacaggaactaaaatcatttatcca
aatgctataaattatagaactgataagacaaaaccctccaagtcttttctatggagttct
agttggaattctacgagtaaaacttctcaaggttcttctggcagtcaacctgtatcacct
tatgcagaattcacagatgtgcctgtattcgatgatgagattgttacttccaacgaaaga
aaaaccttaagaagaatcagcacaatcagtgctcacaaaccagaatttttcaggttacat
tccactcctgaaattgcggatttgactgtattgaatccgaggaagtattgtgtgtcaaac
tcttcctcggataccgaatacagtgaaataattgacacagcttgtgttcctgaaaagaga
acgaagagttcgaccagtattgatgtcagtcattctgtaatgatccacaacctcgtggat
actgacaatgagttcaatcacaaacatgtaaatgtcgaactaaaaactcaactagtcaaa
cccacagatacacaaatgaatgaatatggtctggaagtatatcttagagacaaaaagtca
gaaaaagcattggctgagatttctttaaacgacgagttatcaagtgaggataggtatagc
ctagacctcgaaaaatcaataactaacataaggaagttacgtcttgaaattggggcattt
acggatgatttaataaaagcagaccttgatccaagtgagttgcttattttagcagagcgt
tgtttctgtaatgaagataacagtattcgtagttttaatcatttaatgcaggtaaaattc
aatgatcacgattatatgtcattgaaatcacgcgcaatgccaccaaaatcctctaactta
ctaacgaacgagacatcgagtgtccgtgaacgtagtaaatcccttttgggtcctaaagac
aagttcaaaaaaagttctaatttgaacaaagttgacccaaacttatccgctatctcggat
tcagaaaaatcattcccttcccaagaccactccttttctttagacaatgtaaccctggaa
aacaatgttactcaatttgagttgagagaacttaaacgacaagaacaagaaagagaagaa
gaagaaaggcgtgaacaggaagaagctgctgcggcagaggctgcgaagttagctaaagcg
acacctgtcaccagtcctgacgagccacccagtgacagagttgatggcgatggtaatcaa
agcggggaacaagctggtgaagaggatggtcatgtggcactacgcaagccttcaactaga
tcgccacaaacccaagaaaaacccaaggaagtgcatgttcagaagcctgcacgactatcg
acaccagacgtttcaacaccgccgatttctccaacatctccaaagtcccagtcgtcatat
ccaacaacaccgacaactccgaagggtggcagtggttctgaatccggtactttgcggcgc
aaggaacgaagccgtagtaaatcaccatttagaagtttccgttggaaaaaatcaacaaag
tcacctagcctggatcgaagtggtgtgagcgatgatgatcatagttatactgaacaacgg
agtcctggcgatgacgaatttgaaggaacgttaacgcgtaaacacgaatgggaaagcaca
acaaaaaaagccacgaatcgatcatgggacaaactatatatggtcgtacgtgggcaaaat
ttggtagcttacaaagatcaaaaatcctacaaagctgctgccgaccagccatacaaaggt
gaaccacctctagatcttagaggtgcctctgtacaggtcgccagtgaatacaccaagaag
aaacatgtcttccgagtcaagtctcagagcggagcagacttcctattccaagctaaggat
gacgcagaaatgcttgagtgggtatctgtgttaaatcaagctgcacagggtgtatctggc
gcgagtacatctagagcacatactctgccagcaccgacgcaagctgaaaccaagcggcgt
agtttcttcacactcaagaaaaactaa
DBGET
integrated database retrieval system