Neodiprion pinetum (white pine sawfly): 124222068
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Entry
124222068 CDS
T08966
Symbol
LSm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124222068 (LSm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124222068 (LSm1)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124222068 (LSm1)
mRNA degradation factors
5'-3' decay
Lsm complex
124222068 (LSm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124222068
NCBI-ProteinID:
XP_046488609
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Position
6:26229155..26232117
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AA seq
134 aa
AA seq
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MNVVPGTASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIP
RGVFIVRGENVVLLGEIDGDKEKDLPLSQVPVDDILDAQRREQELKQDQEQLMSKALKER
GLSYIPDLGHDDMF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagtgcccggaacagcgtccctcctcgaagaactagacaaaaagctaatggtt
ctgttaagagatggtagaacacttatcggatatctcagaagtgttgatcaatttgccaac
ctggtccttcatcgaactatcgaaagaattcacgtcggcaaagaatatggagatattcct
cggggcgttttcatcgtccgaggcgagaatgttgttctcttgggtgaaatagatggggac
aaggaaaaggatctgccactatctcaggtgcccgtagatgatatattagatgctcaaaga
cgagagcaagaattgaagcaagatcaagaacaactgatgagcaaagctctgaaagaacga
ggcctctcctacattccggatttggggcatgatgacatgttctga
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integrated database retrieval system
