Neodiprion pinetum (white pine sawfly): 124222256
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Entry
124222256 CDS
T08966
Symbol
DNApol-delta
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03030
DNA replication
npt03410
Base excision repair
npt03420
Nucleotide excision repair
npt03430
Mismatch repair
npt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124222256 (DNApol-delta)
03410 Base excision repair
124222256 (DNApol-delta)
03420 Nucleotide excision repair
124222256 (DNApol-delta)
03430 Mismatch repair
124222256 (DNApol-delta)
03440 Homologous recombination
124222256 (DNApol-delta)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npt03032
]
124222256 (DNApol-delta)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124222256 (DNApol-delta)
Enzymes [BR:
npt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124222256 (DNApol-delta)
DNA replication proteins [BR:
npt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124222256 (DNApol-delta)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124222256 (DNApol-delta)
MMR (mismatch excision repair)
DNA polymerase delta complex
124222256 (DNApol-delta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
124222256
NCBI-ProteinID:
XP_046489002
LinkDB
All DBs
Position
6:complement(978768..987037)
Genome browser
AA seq
1102 aa
AA seq
DB search
MNKRPFSGPPSKKNKFRVDDDDDEYPGSFEAELAIMEQMDDEFQDPSQASGEPDPADPQM
RVRGPDQENTCSKWNRPDPRPFNPQTDSLTFQQIEVDHYIGQPLAGMPGSKIGPVAIMRM
YGVTMEGNSVCCHVHGFCSYFFVTAPEKFNNSHCKPFKDALNRAVLTDMRSKNDKVTEAV
LVVELIYKQSLYGYAGEDLVPFIKITVALPKLVAPCKRLLEKEMIFPTFSDHVYQAFETN
IEFDIRFMVDTHVVGCSWIKLVPGKWKLRGHPGNDLPLTSRCQLEVDVAWDNFIAHPPEG
EWAKVAPFRILSFDIECAGRKGIFPEANHDPVIQIANMLIRHGDTEPFLRNVFTLDTCAP
IIGSQVLSFQKEAVMLEKWADFVRQCDPDIFTGYNINNFDFPYLINRAQHLKVNSFSYLG
RIKDIKSVIKDQVLQSKQMGRRENKHVNFEGRVPFDLLLVLIRDYKLRSYTLNAVSYHFL
QEQKEDVHHSIISDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVS
LCCLLTRGQGVKVVSQLLRKAQEKGYLMPTHQSQGSDEQFEGATVIEPKRGYYNDPIATL
DYSSLYPSIIMAHNLCYTTLLLPATQHKLKLTNEKFSQTPTNAMFVKSSVRKGLLPEILE
NLLNARKLAKTELKNETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSTT
AYGRAMIERTKQEVEQKYCIANGYKHDAVVIYGDTDSVMVKFGVKDMAEAMELGKDAADF
VSSKFIKPIKLEFEKIYFPYLLINKKRYAGLLFTKPDKYDKMDCKGLETVRRDNCPLVAN
MMNTCLQKLLIDRDPDGATDYAKQIISDLLCNRIDISQLVITKELTKTEYAAKQAHVELA
AKMKKRDAGTAPKLGDRVPYVFTSAAKGTPAYLKAEDPIYVLENSIPIDSNYYLENQLSK
PLLRIFEPILGDKAESLLLRGEHTRTKSVATSRVGALAAFTQKKETCMGCKAIMPAGREH
MALCQHCESREPELFQHELLLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYMR
KKVRIELDAQEKRIDRFGIPAW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcggcctttttccggccctccgtccaagaaaaataaattcagggtagacgat
gatgatgacgaatacccaggatcttttgaagcggaacttgccatcatggaacaaatggac
gacgagtttcaagacccgtctcaggcctctggggagcctgaccctgcagatcctcaaatg
cgagtgagaggcccagatcaagaaaacacctgttccaaatggaatcggccagaccctcgg
ccattcaatcctcaaacagactcgctcactttccagcaaatagaagttgaccattatata
gggcagccgctggctggaatgccaggaagcaaaattggaccagtagcaataatgagaatg
tacggagtcaccatggaaggaaactctgtatgctgtcacgtgcatgggttttgttcctat
ttttttgtcactgcgccagaaaaattcaataactctcactgcaaaccattcaaggacgct
ttgaaccgagctgtattaacagatatgagatcgaaaaatgataaagttacagaagctgta
ctggtagtagaattaatctacaaacaatcgctgtacggatatgcaggcgaggacttggtg
ccttttataaaaatcacggtcgccctgccaaagcttgtggctccgtgtaaacgcttgttg
gagaaagaaatgatctttccaacattcagcgatcacgtgtaccaagcctttgaaactaac
atcgagtttgatatcagatttatggtggatacgcacgtggtaggctgttcatggatcaag
ctagtccctggtaaatggaaattaagaggccatccagggaatgacttgcctttgactagc
cgttgtcaattggaagtcgacgttgcctgggacaatttcattgctcatccaccagaagga
gaatgggccaaagttgcgcccttcagaatactaagttttgatattgaatgcgctggacgc
aaaggaattttccctgaggcaaatcacgacccagttattcagattgcgaacatgttgata
agacatggagacaccgaaccctttttgcggaatgtattcacattggatacttgcgcgcca
attatcggttctcaggtacttagttttcaaaaggaagcagtcatgctggagaaatgggca
gactttgtaagacagtgcgaccccgatatatttaccggctacaacatcaacaacttcgac
tttccctacctgataaatcgagcacagcacctgaaagtgaattccttcagctaccttgga
agaataaaggatataaaatctgtgataaaagatcaagtgttacaaagtaaacaaatgggc
aggcgagaaaataaacatgtcaatttcgaaggaagagtgccgttcgatttattgctggtc
ctcattcgagattacaagttacggtcgtatacgttgaacgcggtaagttatcactttctc
caagaacagaaggaagacgtacatcacagtattatcagtgatctacaaaatgggaatccg
caaacacgcagaagacttgcggtttactgtttgaaagatgcctacttgcctttgaggcta
ctggataagctcatgtgcattatcaactacatggaaatggcaagagtgacgggtgtctct
ctctgctgtttactaaccagaggacaaggggtcaaagttgtttcacagctgttgcgaaaa
gcgcaagagaaaggctatctaatgccaacgcatcagagtcagggaagtgacgaacaattc
gaaggagcaacagtcatagagccaaaacgtggatactacaatgatccgattgcgacattg
gattacagttctctatacccgagcataataatggcccataatctctgctacacaacgtta
ctacttccagcaactcaacacaaactgaaactaacgaatgaaaagttttcacaaacacca
actaacgccatgttcgtcaagtcctcagttagaaaaggactccttccagaaattttagaa
aatttattgaatgctagaaagttagctaaaacagagctaaagaacgaaaccgatccattc
aaacaaaaagttttggatggacgacagttggctctgaaaatatcagccaattctgtttat
ggtttcaccggagcacaagtaggcaaattgccttgtctggaaatatctagcagtacgaca
gcttacggtcgtgcaatgatagagcgaactaaacaagaagtggaacaaaaatactgcatt
gcaaacgggtacaaacacgacgctgttgtgatatatggcgacacggattccgtgatggtt
aagtttggtgtaaaggatatggcggaggcgatggagcttggaaaggacgcagctgacttc
gtttcgtcaaagttcataaaaccaatcaagctggaattcgagaaaatttattttccgtat
ctattgataaacaaaaaacgatacgcaggtttattattcactaagccagataaatacgat
aaaatggactgcaagggattggaaaccgtgagaagggacaactgtccgttggttgccaac
atgatgaacacttgtttgcagaaattgttgatagatagagatccggatggggcgacagac
tacgcgaaacaaatcataagtgatcttctctgcaaccgtatagacatttcgcaacttgtg
ataacaaaggaacttacaaagactgaatacgcggccaaacaggctcacgtcgagttggcg
gcaaaaatgaagaagcgagacgcaggaacggctccgaaactcggcgacagagttccgtac
gtttttacgtccgccgcaaaagggacaccggcatatctgaaagcagaggatccgatttac
gtcctcgaaaacagcattcctatagactcaaattactacctggaaaaccaactgtccaaa
cctcttctcaggatatttgaacctattcttggagacaaagctgaatctctattactgagg
ggagaacatacccgcaccaaatctgtagcgacttcacgtgtcggagcattggccgcattt
acgcaaaagaaggaaacttgtatggggtgtaaagccatcatgcccgcagggcgagagcac
atggctttatgccagcactgtgaatctcgcgaacctgaacttttccaacacgaattatta
ctcggcaggaagttggaggaaaaattctgcagattgtggacagagtgtcaaagatgccag
ggtagtttgcatcaggaagttttgtgcaccagccgagactgtccgattttttacatgagg
aaaaaagttaggattgaactggatgcacaggagaagcgaattgacagattcgggattcca
gcctggtag
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integrated database retrieval system
