KEGG   Neodiprion pinetum (white pine sawfly): 124222465
Entry
124222465         CDS       T08966                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124222465 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npt03041]
    124222465 (BCAS2)
   03400 DNA repair and recombination proteins [BR:npt03400]
    124222465 (BCAS2)
Spliceosome [BR:npt03041]
 Complex B
  Other components
   Prp19 complex
    124222465 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    124222465 (BCAS2)
DNA repair and recombination proteins [BR:npt03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    124222465 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HBM CCDC85 Csm1_N Cep57_CLD
Other DBs
NCBI-GeneID: 124222465
NCBI-ProteinID: XP_046489416
LinkDB
Position
6:complement(27570145..27571392)
AA seq 246 aa
MAGEVVVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLPPLNLNAFETTVI
KHEFERLQSRLPMEVLSMKRYELPPPPPGKMNDIAAWNESVENSMAQLEHQATRICNLEL
MMDYGCEAWKCYLEVLMQLVSQAQKQLQGLRKTIQEVNWQRKSMQTQGGEKLRALEAQWV
GLVSKNYEIEQACVHLEEEIHRYKYLKHTGGEAGDVPGEEQEPDIPGDNATETTAMEPTP
EEPRPA
NT seq 741 nt   +upstreamnt  +downstreamnt
atggcaggcgaggtagttgtggacgctttgccgtatatagatcaaggatatgacgaaccc
ggagttagagaagcggctttggcgatggtcgaggaagaaactcgccgttacagaccgaca
aaaaattacttagaacacctgccgcctctcaatctgaatgcctttgaaacaactgtgatc
aaacacgaatttgagaggctccaatctcgccttccaatggaagtacttagcatgaagcgg
tacgaactcccaccaccacctcctggaaaaatgaatgatatagctgcttggaacgagagt
gtggaaaatagcatggctcagctcgaacatcaggctacacgaatctgtaatttggagctg
atgatggattacggctgtgaggcctggaagtgttacttggaagttctgatgcagttggtt
tcgcaggcgcagaaacagcttcagggcttgagaaaaacgatccaggaagtaaattggcag
aggaaatcgatgcaaacccaaggtggcgagaagttgagagctttggaggctcaatgggtg
ggattggtgtctaaaaattatgaaattgaacaagcctgtgttcaccttgaggaggagata
caccggtataaatatttaaaacacactggtggagaggctggcgatgtccccggggaagaa
caagaaccagatattccaggagacaacgccactgagacaacggccatggagcctacacca
gaagaacctcgacctgcgtga

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