Neodiprion pinetum (white pine sawfly): 124222561
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Entry
124222561 CDS
T08966
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X2
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124222561
Membrane trafficking [BR:
npt04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124222561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
cEGF
DUF5050
Vgb_lyase
EGF_LRP2
EGF_CA
Arylesterase
Sigma_reg_N
EGF
ASFV_J13L
EGF_3
hEGF
DAG1
DUF3377
Orf78
SHP
SKG6
Motif
Other DBs
NCBI-GeneID:
124222561
NCBI-ProteinID:
XP_046489660
LinkDB
All DBs
Position
6:3522708..3538129
Genome browser
AA seq
2057 aa
AA seq
DB search
MSARNIRGGQAGSTVQAFLLICSIFGGSGMGPVLSSEVTTDTPANKGAARQMFGSGSLRQ
TGSGPIVLGTTESPFYDGHLYEGPGGFGYNVPGGRNHVSQKSHPQLPGGYHGPPRMPVSQ
PDADTYEASSDVKVRNGAPVNGLYGQSRQGVGRGMDADRGRGGFGDIYGGMGGRGMDETY
VNPDRTRVHNGLQRGHGIGANPNIEGHFGVGGRTLIHELEDESDLTGEYLLPCGWQCKRS
EFLCLQSCTCIPLRSRCDGEIDCEDFQDELDCDNGSGYGGNAECVGETKIRCPLSGKCIS
KDWLCDGDDDCGDFSDESHCGTSQNCTEDQFECKNGLCVQRAWLCDGENDCKDFSDEVNC
TKKVECTQYEFKCQDGSCITLNWHCDQEPDCSDGSDEVNCEKTGVSCGSNEFQCAYPKCV
RHEYRCDGDDDCGDGSDEKDCPGSLTTSCNDNEFRCSGGKCISNKCVCDGNKDCDGGEDE
EMCNHPTPQGCSPHNEFTCSTGTCVPRLWVCDGVPDCPNGEDEQGCAVTCEATQYLCNPP
RVINDTSVAATNSPQPSATHHYHRYCIAIKHVCDGTADCPDGDDELNCPKKRDCTATDKC
TQQCILTIDNKPACACQPGYKLGKDNATCEDINECVFEQDPVCSQTCNNTVGSFVCSCMA
GYVLRPDLRTCKALGANPTLLFANRVDIRQVSLSNSKYTAILKGLHNAIALDFHYKRSTV
YWSDLSMDVIRKAYVNGTGAEDVIRWGLESPTGVAVDWIHNLLFWTDSGTRRVEVITLDT
TMRHVLISSDLDKPRAIVVHPNYGYVYWTDWGPNPKIERADMDGSGRVVLVTESISWPNG
LAIDYTSDRLFWADAKHHIIESAHLDGTDRKKVIRKGVNHPFGITIFEDYVYWTDWHFKS
ISSANKGNGAGFKTIHSGLHFPMDVHSYHPQRQPEYKNRCGDNNGNCSHMCLPNSTGYSC
VCPVGLKIKRDGKNCASTPDNLLIFARKKDLRLRPVDQAARGFDTVIPVDHIESAVALTW
DSNEDTIYWTDVETDTISRAYLNGTNQSVIISYNLESPAGLAMDWITHKLYWTDAGTNRI
ECSNLDGSMRTLLVWRGLDKPRDIVVDPTVGYMYWSDWGEEQKIERAAMDGSDRKILVSK
NLTWPNGLAIDFEKNRLYWADGGTKKIEYSDLNGKGRTVLISTDLPHPFGLVIFKNKIFW
TDWDTQSIHQADKNDGSNRSVVRSGISGLMDVRVFHRHRKTINTPCNKNNGNCSHLCLLA
PAPRFYKCACPTGLVLESNGETCPDMPSEFLVFAHREDIRIISFDVNYTVDIVLPIANLK
NAIGVDVDRRTGDLYWTDTADDLIRKASFDGRTVETIINNGIENADSLVVDYIGQKIYWT
DAGLNSIEVAELDGINRKVLICSGLEKPRAIALYYPAGLLFWSDWGHNARIERANMDGEQ
RMTLIADDLIWPNGLAVDLIGNKLYWNDAKRSVIESAKLDGSNRKVLIHDVRHPYGLTLT
KDFVYWSDWHTKSLHRANRTTGSNKTVILSKIEGIMDIRSVSSEDLYIAENVCEKNNGGC
SHLCLRNPKGYSCACPTGILLNEDKKTCKLTPTNFILFATRETLARVSFDTPEMWDVTLP
ISDIHNAISVDFHWEKQIIIYCDVNLDIIRSINIQNLSDTRVIINSNLTTPSGLAVDWVA
NNLYWADTTRKVIEVARLDGSSRKRVLEQLDDPRALTLFPAKGYMYWTEWGEHPKIERSY
LDGSSRKVIISSDLGFPNGLALDYEKKKLYWADALKDRIETSDLHGQYRVQLVPEATHPF
GLTQYGDHIYWTDWYKKAVERADKTTGKNRIEIRTALDGVMEIKVVSAARQTGWTPCAVE
NGGCSHLCFFTRKNYVCACPDVKDSKPCSTVPSREVPIRKPGTENDPPEEDDDEPTMSSV
PTLVPRKPHHDITGRFPKLSPSNTNFTLKTVVITIVVMVVMIIVILIAIIHLLCQRKTKQ
KKYLYTGRSVLTFSNPNYNASSGDVGPSNSQQDKKSFIWKRLKYDKSQKANTSKVECPIK
LQHLPLHFIQMNETETT
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaggaatattcgaggtggccaagctggctccaccgttcaagctttccttttg
atctgttcaatcttcggcggctcgggaatgggacccgtcctgagctccgaagtcacgact
gacacaccagcgaataaaggagcagcgcgacagatgttcggtagtggcagcttgcggcag
acaggaagcgggcccatcgtcctggggacgacggagtcaccgttttacgacggacatttg
tacgagggccccggtgggtttggatacaacgtacccggcggcagaaaccacgtttcccaa
aaatcgcacccccagcttcccggtgggtatcacggcccgccaaggatgcccgtctctcaa
cccgatgctgatacctacgaggcttccagcgacgtgaaggtcagaaacggcgcaccggtc
aacggtctctacggtcaaagccgtcaaggtgtcggacgaggaatggacgcagaccgagga
cgaggcggcttcggcgacatttacgggggcatgggtggtcgaggcatggacgaaacatac
gtgaacccggatcgcacgcgcgtgcataacggactccaacgcggtcacggaataggagca
aatcccaacatcgaaggacattttggagtcggcggacgcactctgatccacgaattggag
gacgaaagcgatcttaccggagagtacctactgccctgcggatggcagtgcaaaagaagc
gagtttctctgcttgcagtcatgcacttgcatcccgttgaggagtcgttgcgacggagag
atagactgcgaggatttccaagacgaactggattgtgacaacgggtcgggatatggagga
aacgcggaatgcgtcggtgaaacaaaaattcgttgtccattgtctgggaagtgtatttcc
aaagattggctttgtgacggtgacgacgactgcggtgatttctccgatgaaagccactgc
ggaacatctcaaaattgcactgaggaccaattcgagtgcaaaaatggtctctgcgtccag
cgagcttggctttgcgatggcgagaatgactgcaaggatttttctgacgaagttaactgc
acgaaaaaagtggaatgcacacagtatgagttcaagtgtcaggatggtagctgcatcact
ttgaattggcattgcgaccaagaaccagactgtagcgatggttccgacgaggtgaactgc
gaaaaaaccggagttagttgtggcagcaatgaattccagtgcgcttatccaaaatgtgtg
cgacacgagtatcgctgtgacggtgatgacgactgcggtgatggaagtgacgagaaggat
tgtcctggatcattgacaaccagctgcaacgataatgaatttcgatgctctgggggcaag
tgcatcagcaacaaatgcgtatgtgacggaaacaaagactgtgacggtggtgaggatgag
gaaatgtgcaaccacccgacacctcagggatgttcacctcacaacgagttcacatgctcc
accggcacctgcgtcccgcgattgtgggtatgcgacggcgttcctgactgccctaatggt
gaagatgaacaaggatgcgcagtgacttgtgaggcgacccagtacttgtgcaacccgcct
cgagtaatcaacgatacatcagttgctgctactaactcgccccaaccatcagcgacgcat
cactatcaccgatattgcatcgctataaaacacgtctgcgatggtacagccgactgtccc
gatggtgatgatgaactcaactgtccaaagaaacgcgactgcactgcgacggacaagtgc
acgcagcaatgcatcttgacgatagataacaagccagcctgcgcttgccagcctgggtac
aagctggggaaagacaatgcaacgtgcgaagatatcaacgaatgtgtattcgaacaagat
ccagtctgtagtcaaacttgcaacaataccgtaggctcattcgtctgcagctgtatggcc
ggttacgtcctccgacctgacctcagaacctgcaaggccttaggggcaaatcctacactc
ctttttgcgaaccgggttgatataagacaggttagtctcagcaattccaagtacacagct
atcctgaaggggttgcacaatgccattgctttggactttcattataaacgaagcactgtt
tactggtccgatttatccatggatgtcatacggaaggcgtatgtaaacggaaccggtgcc
gaagacgttattcgatggggcctggaaagtccaaccggtgttgctgtcgactggattcac
aatcttctgttctggactgactctggaacacgtagggtggaagtaataactttagataca
acaatgcggcacgtcctgatatctagtgacctcgacaagccacgggccatagttgttcat
ccaaactacggatacgtttactggacggattggggtccaaatccaaagatcgaacgtgca
gacatggacggttcaggcagggtcgttcttgttacggagtcgatatcctggccaaatggt
ctagcaatagattacacgtccgatcgcttattttgggcagacgcaaagcatcatattatc
gaatctgctcaccttgatgggacggataggaagaaggtcataaggaagggagttaaccat
ccctttggtatcaccatattcgaagactatgtctactggactgactggcacttcaagagc
atatcctctgcgaataagggaaacggtgctggattcaaaactattcattccggtcttcac
ttcccgatggacgtgcatagctatcatccgcaacgtcaacctgagtataaaaatcggtgt
ggtgataacaatggaaactgctcacacatgtgtctcccaaatagcaccggttacagttgc
gtctgtcctgtggggttgaagattaaacgagatggcaagaactgcgcctctactcccgac
aatcttctgatatttgcaaggaagaaggatctcagattacggccagtcgatcaggccgca
agaggattcgacactgttattcccgtcgatcatattgaaagcgctgtcgcacttacgtgg
gacagtaatgaagatactatatactggacagacgttgagacggacacgataagccgggcg
tacttaaacggcactaatcagagtgtcatcatcagttataacttagaatctccagctggt
ttggctatggattggataacgcacaagttatattggactgatgctgggacgaacagaatt
gagtgttcaaatttagatggatcgatgagaactctactggtatggagggggcttgacaaa
ccgagggacatcgtggtcgacccgactgtcgggtatatgtactggagcgattggggcgaa
gaacagaaaatagagagggccgcgatggacggcagtgatcgcaagattctcgtgagcaaa
aacttgacatggccaaatggattggcaatcgacttcgaaaagaaccggctctactgggca
gatggtggtaccaaaaaaatcgagtactctgacctgaatggcaaaggccgaaccgtacta
atctccactgacttgccgcatccctttggtttggtgattttcaaaaataaaatattttgg
accgactgggacacgcagagtattcatcaagcagataaaaacgacggttctaatcggagc
gtggttagatcaggaatatccggtctcatggacgtcagggtatttcaccgtcatcgaaag
actatcaacacaccttgcaataagaacaacggcaattgttcgcatttgtgtctgttggca
cccgctccgcgattctataaatgcgcgtgtccaactggtctggttttagagtcgaatgga
gagacatgtcctgatatgccgagtgaattcctggtattcgctcacagagaagacatcaga
ataatatctttcgacgtcaactacaccgtggacatagtactgccaatagcgaacctaaaa
aatgcaattggagtggatgtcgatagacgaaccggcgatctgtattggaccgatactgcc
gatgatctcatcaggaaagcaagttttgacggaagaactgtagaaacgataatcaacaac
ggaatcgagaacgccgacagtttggtcgtagattacataggtcaaaagatatactggaca
gacgctggactaaacagcatcgaagttgctgagctcgatggtataaacagaaaggttctg
atttgctcaggactcgaaaaacctcgagctatcgctctgtactatccagctgggcttctt
ttctggtctgactggggtcacaacgcccgtatagaacgagctaatatggacggcgaacag
aggatgactttaatagccgacgaccttatctggccgaacggtttggccgttgacctaatt
gggaataaattgtactggaatgacgctaagagaagcgtgattgaaagcgccaagcttgat
ggttcaaatagaaaggttcttatccacgatgttcgtcacccttacgggttgacactgacc
aaggacttcgtttactggagcgactggcacacgaaatccttacaccgtgcgaatagaacg
acgggatctaacaaaacggtaatattgtccaaaatagagggaatcatggatattcggtca
gtcagcagcgaggatctttacatcgctgagaacgtgtgcgaaaagaataatggcggatgc
tcacatttgtgccttcgcaacccgaaaggttactcttgcgcttgtccgaccggaatcctt
ttgaacgaggataaaaagacgtgcaaattgacccccacaaacttcatactgttcgcaacg
agggaaacgctcgccagggtgtcgtttgacacgccagagatgtgggacgtgactttacca
atcagtgacatccacaatgcaatctcagtagattttcactgggaaaaacaaattataatt
tactgcgacgtaaacttggacataattaggagtatcaacatccaaaatttatccgacact
cgggtaatcataaactcgaatctcacaacgccgtcgggcctggccgttgactgggttgct
aacaatctttactgggctgacaccaccaggaaagtgatcgaagttgccaggctggatggc
agcagtcgtaaaagagtcctggaacagctagacgacccaagagcgcttaccttgttcccg
gcaaagggatacatgtactggaccgaatggggtgaacatcccaaaattgaaaggtcttac
ctggacggttcgagtagaaaagtgatcatctcttcggacttgggctttccaaatggcttg
gctcttgattacgaaaagaaaaagttgtactgggccgatgcgttgaaggaccgaatcgag
acgtccgatttacacggacaatacagagtgcagctggtcccggaagcaactcatcctttc
ggcttgacgcaatacggggatcacatctactggacggattggtacaagaaggcagtggaa
cgtgctgacaagaccactggaaaaaatcgaattgagattcgaactgcgctggacggagta
atggagatcaaagtcgtctcggccgcaaggcaaaccgggtggactccttgtgccgtggaa
aacggcggctgtagtcatttgtgcttctttacgcggaagaactacgtctgcgcttgtccg
gacgttaaggattccaaaccctgctcgacggtaccgagcagagaagtcccgataagaaaa
ccagggacagaaaacgatcccccggaggaagacgatgatgagccaaccatgtcgtctgtc
ccaactcttgtacctcggaagccgcatcacgatatcaccggcagattcccaaaactttcc
cctagtaatacaaatttcacattgaaaacggtggtaatcacgatagtcgtgatggtcgtt
atgataatcgtcattttaatcgccatcatccatcttctgtgccaacgcaagaccaaacag
aaaaaatacttgtacaccggaagaagtgtcctcactttttccaaccccaactacaacgct
tcaagcggcgacgtaggcccgagcaattcgcagcaagataaaaaatcgttcatctggaaa
agattgaagtacgacaagtcgcagaaagctaacacatccaaagttgaatgcccaatcaaa
ctgcaacatttgccacttcactttatacaaatgaatgaaacagaaaccacctag
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