Neodiprion pinetum (white pine sawfly): 124222902
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Entry
124222902 CDS
T08966
Symbol
Tif-IA
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124222902 (Tif-IA)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
124222902 (Tif-IA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Menorin
Motif
Other DBs
NCBI-GeneID:
124222902
NCBI-ProteinID:
XP_046490344
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Position
7:448340..457739
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AA seq
603 aa
AA seq
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MSVTSSRLSSVSSILKGPGIRAKIINQANRVQFKLPKNLKDILLSFESGTSHKQYENLVC
TIRDSEIRESELIDLLTETHACISLLGPSHRLFIEALLTLNWTTRSLQVTTIYKGFLEDL
VSAHNYHAKLIIDKLVDRFKSEEDDNTTEWEFSKSKNQDLQTLRHVHDVLRMLMKIIPMA
TDVLLQSLVANYPYWRLNTQRHEIYIYALLQILEYAPHLRSDILSLIINRLIVLDVYAPR
SEIDECEDDEDMEESDDAAQIIFALDEVQGDAIKNEKQKEIRKMKHPVAHTLDVCMEQVL
AYIYNCCHNQGILNWESLKSLYHDVLKMFEQIILPTHASQHVQFIMFYICSFKPTVSEAF
VNWLWQKVSDPNVAPVIRQSSVSYIASLLARATFIQLEMIKTTLLKMSMWIHSYISSQDS
LECANSDVRVHGVFYTVCQAMFYVIAFRHKHLVETRKNLLFLQSLNLTKIIACRLNPLKV
CQSAVVRNFAAVTRTYQLAYCYTIIEHNARSNLPVVQSTNRVTLWLDTFFPFDPYILLRS
GSRFTSIYMVYQGSVSDEESTLTTCRDDNDDDDFMDETSIPLSSSCNHMDVFSYGTSPGF
LQL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgacctcgtcaaggctcagcagtgtatcgtcgatattgaaaggcccaggcatc
agagcaaaaattataaaccaggcaaacagagtacaattcaaacttccaaaaaatctcaag
gatatattgcttagcttcgaaagtggcacaagtcataagcaatatgaaaatcttgtgtgt
accattcgtgactcggaaattagggaaagtgagttgatagatttgttgacggaaacacac
gcttgtatctcgttacttggcccgtcacatagattatttatcgaggcactgctgacgctt
aattggacaaccagatcgttgcaagtaacgacaatctacaaaggatttctcgaagatcta
gtatctgctcataactatcatgccaagcttataatagacaagctagtagatcgatttaaa
tctgaagaggatgacaatactacggaatgggaattttccaaatcaaaaaatcaggatctt
caaacgttaaggcatgtgcatgacgtcctgcgaatgcttatgaaaattattcccatggct
accgacgttttgttacaatcacttgtagcaaattatccttactggaggctcaacacgcaa
agacatgaaatttacatatatgcccttcttcaaatactggagtatgccccacatctcaga
tctgacattctttcactgataatcaacaggttaattgttttggacgtttatgcgccacga
tcggaaatagacgagtgcgaagatgacgaagatatggaggaaagtgacgatgcggcacag
atcatattcgcattagatgaagtgcagggtgatgcaataaaaaatgagaaacagaaggaa
atacgaaaaatgaaacatcctgtggcgcacacgttggacgtatgcatggagcaggtgctt
gcatatatatataactgctgccacaatcagggaattctcaactgggaatcgttgaaaagt
ctctatcacgatgtcctaaagatgtttgaacaaataatattgcccacgcacgccagtcag
cacgtacagtttatcatgttctatatttgtagttttaaaccgacagtatccgaagctttt
gtaaattggctgtggcagaaagtctcagacccaaacgttgcccctgttatacggcaatct
tccgtatcctatatcgccagtctactcgccagagctacatttattcaacttgaaatgatc
aaaacaacgttattgaaaatgtctatgtggatacacagttacatatcgtcgcaagatagc
ctcgagtgcgccaatagcgatgtaagggtgcacggggtattttataccgtatgccaggca
atgttctacgtcattgctttcaggcacaaacatctcgtcgagactagaaaaaacttgttg
ttccttcaaagcctgaatctgacgaagattatagcttgtcgactgaatccattaaaagtt
tgccaatcggcagtagtgcggaattttgcggctgtaacgcgcacctaccagctggcctac
tgttacacaataatcgagcacaatgctcggagtaatctacccgtcgttcaaagtaccaat
cgtgtcactctctggctggatactttctttccttttgacccctacattctcctgagaagt
ggctcaagatttacctcgatttacatggtatatcaaggcagcgtctccgatgaggaatca
acattgaccacttgcagagatgataatgacgatgacgattttatggatgaaacctcaatt
cctttatcgagctcgtgcaatcatatggatgtcttctcttatggaacgtcacctggtttc
ttacaactttga
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