KEGG   Neodiprion pinetum (white pine sawfly): 124222918
Entry
124222918         CDS       T08966                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
npt  Neodiprion pinetum (white pine sawfly)
Pathway
npt03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:npt00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124222918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npt03021]
    124222918
Transcription machinery [BR:npt03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     124222918
SSDB
Motif
Pfam: TH1 Vps8
Other DBs
NCBI-GeneID: 124222918
NCBI-ProteinID: XP_046490374
EnsemblRapid: LOC124222918
LinkDB
Position
7:complement(4407917..4413356)
AA seq 583 aa
METDYDEDRGGWGDDMGRGGPDDFGGDDGTDNPQDVLKECLDKFKTPDYIMEPGIFTQLK
RYFQAGGNPEQVIELLSQNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTF
DPKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGE
ITSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQIL
AQEPRGGFTMKRLSQEITKCAQQNRHDVTPITMALNGAAGSPSACQALGSMLSRNTLNPA
DITVLFRNYSNPEPPPVELIRNPQFLELLVDALFKPGVKVNPEHKSKYINLLAYAASVCE
TPAKKGTQRKINKDELKTTMQAIEKVHNICNINKGSTELIAELNTLYQCIRFPVVSVGVI
RWVACTVTEPSYFKLSTEHCPIHLALLDEVVACHPLLHPKVLQLLVQLFESKQDELEILV
QLEMKKMLIDRMVNLLSRGCVVPVVCYIKQCWQRSDTDVSLIRYFVTEVLEAIAPPYTPE
FIQLFLPMVEDDEITGTMRGDGDNDLVSEFIVHCKAHSGTAVR
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggagactgattatgatgaggatcgaggaggatggggagacgacatgggtagaggtggc
ccagacgattttggaggtgacgatggaacagataatcctcaagatgttcttaaagaatgt
ttggacaagtttaaaacgccggactacatcatggagcctggtatatttactcagttgaaa
cgatatttccaagcaggcggtaatcccgaacaagttattgaattattgtctcaaaattat
acggcatgtgctcagatggcaaatcttctggccgaatggttaattcttgctggtgtaaaa
gtaacggatgtacaagctatggtagaaaataatctcaaagacatgattcttaaaacgttt
gatccaaaaaaggctgacaaaattttcactgaggagggtgaaactccagcctggttaaca
gagatgatacaacatcctacttggcgttcactaatttatagacttgctgaagaatatcct
gattgcttgatgttaaattttaccataaaacttatatctgatgctggattccaaggagaa
ataacaagcatttcaacagctgcacaacaaatagaagtattctcgagagtattaaaaact
gccattgcaggattccttcaaaatactgaggactggcaatctagcatacaggaatgtgcc
aaaatggtttgtcatgggcaacatacatatgtgtacagtcaagtattgttacaaatttta
gcacaagaacctcggggcggttttacaatgaaacgactttcacaagagattacgaagtgc
gctcaacagaaccgtcacgacgtaactcccataacaatggcattaaacggagcagctggt
agtccaagcgcttgtcaagccttaggttcgatgttatcacgaaatactttgaatccggct
gatataacagtattgtttaggaattactccaacccagaacctcctccggttgaattaatt
cggaatcctcaatttttagaattattggttgatgctctatttaagccaggagtaaaggta
aacccagagcataaatcaaagtatattaacttgctggcatatgcagctagtgtttgcgaa
acaccagccaagaagggaacacaacgaaagatcaacaaagatgaattaaaaaccacgatg
caagccatcgagaaagttcataacatttgcaatattaataaaggttcaactgaactgata
gccgagttgaacacgttgtatcagtgcattagatttccagtggtgagcgttggtgtgatc
agatgggttgcatgtacggtaacagaaccatcgtattttaaattgagcacagaacactgt
cctatacatttggctcttctggacgaggttgtagcctgtcatcctctcttacatccaaaa
gtgcttcaactcttggtgcagttatttgagagcaaacaggatgaactcgaaatacttgtt
cagttggagatgaaaaagatgctgatagaccgaatggtcaatttattgagtcgaggatgt
gttgtccctgttgtatgctatattaagcagtgctggcaacgcagtgacactgacgtttcc
cttattagatattttgtcaccgaggttttagaggctattgcaccaccatacactccggaa
tttatccaactatttttacctatggtggaagatgatgagataacaggcacgatgcgtggc
gatggtgataacgaccttgtttctgagttcatagttcactgcaaggcacacagtggcaca
gctgtgagatga

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