Neodiprion pinetum (white pine sawfly): 124222918
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Entry
124222918 CDS
T08966
Symbol
TH1
Name
(RefSeq) negative elongation factor D isoform X2
KO
K15181
negative elongation factor C/D
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124222918 (TH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124222918 (TH1)
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
124222918 (TH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
TPR_Vps8
Motif
Other DBs
NCBI-GeneID:
124222918
NCBI-ProteinID:
XP_046490374
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All DBs
Position
7:complement(4408512..4413331)
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AA seq
583 aa
AA seq
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METDYDEDRGGWGDDMGRGGPDDFGGDDGTDNPQDVLKECLDKFKTPDYIMEPGIFTQLK
RYFQAGGNPEQVIELLSQNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTF
DPKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGE
ITSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQIL
AQEPRGGFTMKRLSQEITKCAQQNRHDVTPITMALNGAAGSPSACQALGSMLSRNTLNPA
DITVLFRNYSNPEPPPVELIRNPQFLELLVDALFKPGVKVNPEHKSKYINLLAYAASVCE
TPAKKGTQRKINKDELKTTMQAIEKVHNICNINKGSTELIAELNTLYQCIRFPVVSVGVI
RWVACTVTEPSYFKLSTEHCPIHLALLDEVVACHPLLHPKVLQLLVQLFESKQDELEILV
QLEMKKMLIDRMVNLLSRGCVVPVVCYIKQCWQRSDTDVSLIRYFVTEVLEAIAPPYTPE
FIQLFLPMVEDDEITGTMRGDGDNDLVSEFIVHCKAHSGTAVR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggagactgattatgatgaggatcgaggaggatggggagacgacatgggtagaggtggc
ccagacgattttggaggtgacgatggaacagataatcctcaagatgttcttaaagaatgt
ttggacaagtttaaaacgccggactacatcatggagcctggtatatttactcagttgaaa
cgatatttccaagcaggcggtaatcccgaacaagttattgaattattgtctcaaaattat
acggcatgtgctcagatggcaaatcttctggccgaatggttaattcttgctggtgtaaaa
gtaacggatgtacaagctatggtagaaaataatctcaaagacatgattcttaaaacgttt
gatccaaaaaaggctgacaaaattttcactgaggagggtgaaactccagcctggttaaca
gagatgatacaacatcctacttggcgttcactaatttatagacttgctgaagaatatcct
gattgcttgatgttaaattttaccataaaacttatatctgatgctggattccaaggagaa
ataacaagcatttcaacagctgcacaacaaatagaagtattctcgagagtattaaaaact
gccattgcaggattccttcaaaatactgaggactggcaatctagcatacaggaatgtgcc
aaaatggtttgtcatgggcaacatacatatgtgtacagtcaagtattgttacaaatttta
gcacaagaacctcggggcggttttacaatgaaacgactttcacaagagattacgaagtgc
gctcaacagaaccgtcacgacgtaactcccataacaatggcattaaacggagcagctggt
agtccaagcgcttgtcaagccttaggttcgatgttatcacgaaatactttgaatccggct
gatataacagtattgtttaggaattactccaacccagaacctcctccggttgaattaatt
cggaatcctcaatttttagaattattggttgatgctctatttaagccaggagtaaaggta
aacccagagcataaatcaaagtatattaacttgctggcatatgcagctagtgtttgcgaa
acaccagccaagaagggaacacaacgaaagatcaacaaagatgaattaaaaaccacgatg
caagccatcgagaaagttcataacatttgcaatattaataaaggttcaactgaactgata
gccgagttgaacacgttgtatcagtgcattagatttccagtggtgagcgttggtgtgatc
agatgggttgcatgtacggtaacagaaccatcgtattttaaattgagcacagaacactgt
cctatacatttggctcttctggacgaggttgtagcctgtcatcctctcttacatccaaaa
gtgcttcaactcttggtgcagttatttgagagcaaacaggatgaactcgaaatacttgtt
cagttggagatgaaaaagatgctgatagaccgaatggtcaatttattgagtcgaggatgt
gttgtccctgttgtatgctatattaagcagtgctggcaacgcagtgacactgacgtttcc
cttattagatattttgtcaccgaggttttagaggctattgcaccaccatacactccggaa
tttatccaactatttttacctatggtggaagatgatgagataacaggcacgatgcgtggc
gatggtgataacgaccttgtttctgagttcatagttcactgcaaggcacacagtggcaca
gctgtgagatga
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