Neodiprion pinetum (white pine sawfly): 124223042
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Entry
124223042 CDS
T08966
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124223042
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124223042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_8
TPR_14
TPR_12
TPR_17
TPR_16
TPR_11
TPR_6
TPR_10
TPR_9
TPR_7
ANAPC3
TPR_MalT
PknG_TPR
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
124223042
NCBI-ProteinID:
XP_046490611
EnsemblRapid:
LOC124223042
LinkDB
All DBs
Position
7:26013685..26019576
Genome browser
AA seq
1238 aa
AA seq
DB search
MASIEIPLRDTDEVIELYLDQLPDGDEVLGILRQEHAQLSIWVNLALEYYKQQKIEDFIK
ILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTADK
IIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGA
LAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQDKAKMAFERALQLDAQCVGALVGLSVLK
LNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENE
AMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAAQ
CFEKVLKAQSGNYETMKILGSLYANSSSQSKRDIAKSHLRKVTEQFPDDVEAWIELAQIL
EQSDLTAALNAYATATRILKDKVQADIPPEILNNVGALHYRLGNLEEARNNLEESLARSK
TDAEQDPVYYNSIAVTTTYNLARLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMAR
DKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKSPTTSTDAY
SLIALGNIWLQTLHQSGKDKDREKRHQDRALAMFKQVLRNDPRNIWAANGIGAVLAHKGC
VNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQY
LGRAYFKAGKLREAKMTLLKARRVAPQDTLLLYNIALVLQRLATQILKDEKSTLVIVLQA
VHELGLSHKYFQFLGMQGEKMDQLAEIEARKCQDLLSQAQYHVARARRLDEEEKILRKKQ
EEERQAFRIRQTEEQKKVEDMRRQKSEAMLQKRQEYVEKTKNVLLFGDMPSEKPTKKGRK
VRSEQYLSDSGSDRNERTEDSAPREKKRKRKSSGERKERKSSGKGRRKRHANSGESGGSG
SDRPKTKRGRKAGGSNKGKGFRKSGTADLSSKQKMRIVSKETISTSESESDNERPNMASG
NESGEENAGRGRRRIASESEGSRASRSRSRSRSKSSSRSKSGSRSRSRSGSRSRSGSRSR
STSRKSASRSRNQSRSRSRSNSGSRKSGSRSRSRSRGSSGSRKSHSRSRSRSGSGSRSRS
RSKSGSRSRSRSKSGSRSRSRSRSRSRSRSRSGQSKSKSRSRSRSGSRSRSRSKSGSRSR
SASGSARSASPVSRKSISGSEDGSRHSSPQRGGQSGSE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatcgagatacctcttcgtgatacggacgaggtaatcgaattgtacctggat
caattacccgacggcgatgaggttctcggtattttgcggcaggaacatgcccagctcagc
atctgggtcaacctggcgctcgagtattacaaacaacagaagatcgaggattttattaag
attctggagtcgtcgaggatcgacgcaaacatcgactacagggattatgaaaaagaccag
atgcgagcactggacatgctggccgcgtactacgtccaggaggcgaatcgcgagaagaac
aaagacaagaagagagatctcttcaccaaggcaacgttgctctacactacggcggacaaa
atcatcatgtacgaccagaatcatctcctcggtcgagcctatttctgcctcctcgaaggg
gacaaaatggaacaggcagatgcacagttcaacttcgttctgaaccaatcgcctaacaac
attccgtcgctcttggggaaggcgtgtatagcttttaacaagaaagactatcgcggagct
ttggcattttacaaaaaggcactcaggacgaatcccaattgcccggcggcggtcagactc
ggaatgggacattgttttatgaaactgggtaaccaggacaaagccaaaatggcgtttgag
agagctttgcagttggacgcgcaatgcgtcggagctctggtcggcctgtctgtacttaaa
ttgaatcagcagcagccggacagcatcagaacgggtgttcaaatgttgtccaaggcctac
acgatagactcgacaaatccgatggttctgaaccatttggcgaatcatttcttcttcaag
aaagattacaacaaagtgcaacatttggctctgcacgcttttcataataccgaaaatgag
gctatgcgtgctgagagctgctatcaactcgccagagcctttcacgtccagggagattac
gaccaagcctttcaatactattatcaggcgactcaattcgctcccccggttttcgtcctg
cctcattttggccttggtcaaatgtacgtctatcgtggagatgccgagaatgcagcgcaa
tgttttgaaaaagttctgaaagcccagtccggcaattacgaaacaatgaaaattcttggc
tctttgtacgccaactcaagctcccagtcgaaaagggacatagccaaaagtcatctgaga
aaagtaacggagcaatttcctgacgatgtcgaagcgtggatcgaattggctcagattttg
gagcaaagcgatctaacggctgcattgaatgcttatgctacagccaccagaattcttaaa
gacaaagttcaggctgatattccacctgaaatccttaataacgtcggtgctcttcattac
agacttggaaatttagaagaggcaagaaacaacctggaggagtctttggccaggtcgaaa
actgacgctgaacaagatcctgtttattacaattccattgcagtcactacgacgtataat
ttggctcgcctaaacgaagcattgtgcgtatttgaccgggcagaaaaactgtacaaagac
attttaaaagaacatccgaattatgtggactgctacttgcggttaggctgcatggccaga
gataagggtcaaatttacgaagcttcggattggttcaaagatgccttgaggataaataac
gagcatccggacgcctggtcactcttgggaaacttacatttggctaaaatggagtgggga
ccgggacaaaaaaaatttgaacggatcctgaaaagtccaacgaccagcacagatgcctac
tcgcttattgccttgggtaatatttggctgcagactcttcatcaaagtgggaaagacaag
gacagagaaaaacggcaccaggacagagccttggccatgttcaagcaagtattaagaaat
gatccaagaaatatttgggccgcaaacggtataggagctgtacttgctcacaaaggttgc
gtcaacgaggccagagatatatttgcccaagtcagagaagcaacagctgaattttgcgat
gtctggttgaacattgctcacatttacgtggagcaaaaacaattcgtcagtgctattcag
atgtatgaaaactgcttgcgtaaattctacaagtatcatcacgtagaggttcttcaatac
ttgggcagagcttatttcaaagctggaaaactgagggaagctaaaatgactttgttaaag
gctcgcagagtagctccccaagacacattactgttgtacaatattgctctggtcctacaa
agattggcgacgcaaattttgaaggatgaaaaatcgacgttggttattgtattgcaagct
gtacacgaattaggattatcccacaaatattttcaattcctgggtatgcagggtgagaaa
atggatcaacttgctgaaattgaggcaagaaaatgtcaggatttgctgtcgcaagcgcaa
taccacgttgctcgagcacgaaggctggatgaggaggaaaaaatcctccgaaaaaagcag
gaggaagaaaggcaagccttcagaatacgccagacggaagaacagaaaaaggtggaagat
atgcgtcgccagaaatcagaagccatgttacaaaaacgacaagagtatgtggagaaaacg
aaaaatgttttactatttggtgacatgccatcagaaaagcctacaaagaagggtaggaaa
gtaaggtctgaacaatatctaagcgatagtggctcagatagaaatgaacgtaccgaagat
tcagctcccagagaaaaaaaacgcaagagaaagagcagcggtgagagaaaggaacggaaa
tcgtcaggaaagggaagaaggaaaaggcatgctaacagcggagaaagtggaggttcggga
agtgatcgaccgaaaactaaacgtggcagaaaagcgggaggaagtaacaaaggtaaagga
tttcgcaagagtggcaccgctgatttatcaagtaaacaaaaaatgcgaattgtttctaaa
gaaactatttcgacaagtgaatctgagagcgataatgaaaggcctaacatggcgagcgga
aacgaaagcggggaagaaaacgcagggcgaggaaggcgtagaatcgcatcggaatccgaa
ggttctcgtgcctcacgttccagatctcgttctaggtcaaagtctagcagccgttcaaag
agtggatcccgatcgcgttcaagaagcggttcacgatccaggagtggatctaggtccaga
tctacatctcgcaaaagtgcctcgaggtcgcgaaatcaatcacggtcacgctccagatct
aacagcggatcaagaaaaagtggttcgagatcgcgatccagatctagaggaagcagtggc
tcgaggaaaagtcactctaggtccagatccagatccggatccggctcacgatcgagatca
agatcaaaatctggttcaagatcacgatccagatcgaaatcaggatcaaggtcaagatcg
cgatcaaggtcacgatcacgatcaagatcacgctcaggccaaagcaagtccaagagtagg
agtaggtcacggtccggatcaagatcgagatcgagatcaaaaagtggctccaggagtaga
agtgcgagcggatcagcaagatccgcaagtcctgtgtctcggaaatcgatatctggcagc
gaagatggttctcgccattcgagtccgcaaagaggtggacagagcggtagtgagtaa
DBGET
integrated database retrieval system
