Neodiprion pinetum (white pine sawfly): 124223206
Help
Entry
124223206 CDS
T08966
Symbol
RhoGEF2
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
Organism
npt
Neodiprion pinetum (white pine sawfly)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
RGS-like
PH_16
PDZ
C1_1
PDZ_6
PDZ_2
RGS
PH
PH_13
SOS1_NGEF_PH
C1_2
PDZ_Tricorn
MAP3K_TRAF_bd
Motif
Other DBs
NCBI-GeneID:
124223206
NCBI-ProteinID:
XP_046490919
LinkDB
All DBs
Position
7:complement(22069383..22114367)
Genome browser
AA seq
1716 aa
AA seq
DB search
MNGSGGPRRSAAAAGGNGSGVGEPPPIATLVVYKDEAGYGMKVSGDNPVYVQSVKEGGAA
ARAGLHSGDKIIKVNGVNVMQSTHTDVVQLIKSSTQVVLTVQQKPSTGLQSPLTAHQIQR
PVSLSGCGTGMVSLPSPPTSTPLHRAWTAPAPCGAAPSTARITGPQPVDHEKLRQLETQR
VNTFQQMLETEQQYLQMLRDNLAKAGAGGGGENNVATWQTELVGAERRVRTLQDQLTAIT
NNGQLYSLVTNTPPSPNRYSPPSDVPPPLPSRKSLSVQNLAPPPLPPRPTPMSNTHNTVQ
SDLERHQLTHLTPPANSHGIPTSFSQGANLGSAALNKHQRTKSSPEQLDKTYLPALSPAE
ASRRLIASESMNDLSRSKFGRHSGIDLDDPPRITPPGTPPPPYPQSSGSTSDHGSSTIND
SIGESFVTVSPVKQAVLNENSPGLPPIQQPIMSMEDDDMSDQEVGQLEDHGPFKSLSRLW
EHHAHLAVFINYVLSNSDPSSLLFYLITDLYKEGNAKEMRKWAYEIHSSFLVPGAPLRLN
NVDENVAREIDDVLLKESDKEEILRKIFWKARARAKEELNEQLADFQQKRTAGLGTLFGP
SDAQLDESTNDKAREAQVIDTFLLPKMEPYLEDTEKERDDSREFTTAAGLATILTKIFQV
RAATLDRFPTFVSKDKSNFKARLLTGKTRKLTVRGHHFVVHQYFTVTYCNHCQLIIWGVG
PQGYQCSDCSLNVHRQCVHVVDENCPGPLVVRKEKGDRISKFMGIIRPERKPPSSHHHLS
QHFSHNLDRIKKSEDDSGVLTDGENGDHRGGGFGTGSAGGNSERGRGGSGYGTGAEHAES
MDDPSSREDIAEMLQQNIPSKPKTSTINRSESYKEQRLHHKRHQREKRKTSDPNLSKTKA
GFSDCEATGTFPGNSAGSSSTSSLSTRSLDSLSTSLEHVHPAATSANTTASWDSDVDVEA
DPPDWSQGVAEDVLARLTNSEKKRQEVINELFHTERSHVRALRVLSHVFHKPMVESQVLP
QEQILLLFSNLDEMLEIHSGFNQAMKSKKKENPCVGDVGDLLLGMFDGPAGEAFERAAST
YCAKQQVALDALRDRRKKDPKLHAFLNEVEANPLCRRLQLKDHILTGMLRLTKYPLLFEN
LAKYTPASNEKEKAAVLRSLERSKEVLNQVNQAVRVAEDYHRLAEIQRTMDRSAFDKFDH
STVNEFRNLDITKRKLIYEGPLQWRMVNRAKPVDLHVVLLDDTILLLHRQDEKYLLKFIN
TNQVNSVLSPIVKVSTVLVRHNAVDKNSLYLVNTSQSGAQIYELVANSPAERKLWFKHIT
EACEAFKTRDREGRRPPHPVPPVEEPTPLVQDTSTAENEANSSKGDQEEPQPDEVTPEEP
ATSVERREEEENSSAAVEAPTETEKPDQPEEPEQERQTETTEQPQQADRDSVNTSVATGA
CGDPLRLVTCTQSSLIEPDEVRVEVRPIHLAEPVLTPIERLRRKDALIKEALMEKQALVA
DILNVPREDFEHLADMASEPSPIQKEPTELILAAVSQANQLMEMLNSSLNVTETETVLAS
RGASVSAVGSCEAPGCPAPRPHSLSHHPSIPVASLQPVCSSLASQLSQLLEIIKDREEER
ERMRRELRRSREKLHAIDADVQRRGVLQNLNTSTHTQTDPSESLNGEGFVELNLDEFVDA
FSDPEPDLDSTQALGEHRLTEVDVEENPHGVGDSVG
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaagcggtggtccacgtcgcagtgccgctgccgccggtggaaatgggagcgga
gtcggggaacctccgccgatcgccaccctcgtagtctacaaggacgaagcaggatacggg
atgaaggtttccggcgacaaccccgtctacgttcaatccgtcaaggaaggtggcgcggcg
gcgagagcgggacttcactctggtgacaaaataataaaggtgaacggtgtcaacgtaatg
cagtcaacgcacaccgacgtcgtccagctgatcaaatcctcgacgcaggtggttctgacg
gtgcaacagaagccctcgacgggattgcagtcccccttgaccgcccaccagatccaaagg
ccagtcagcttgtcgggctgcggtacaggcatggtgtctttgccttcgcccccgacgtcg
acaccgcttcatcgtgcttggacggcccccgcaccctgcggagccgccccttcgacggcc
cggataacgggcccccaacccgttgaccacgagaaattacggcagctggaaacacagcgg
gtaaacaccttccagcaaatgctggaaacagaacaacaatatcttcaaatgttacgtgac
aatttggcaaaggctggagccggaggagggggagaaaacaacgttgctacttggcaaacc
gagcttgtcggcgccgaaaggcgggttcgcacccttcaggaccagctaacagcaataacg
aacaacggtcagctttactcgttggtaacaaacactccgccttccccaaaccgttactca
cctcccagcgacgtgccgccacctttaccctcccggaaatccctctccgtgcaaaatctc
gcccctcctccgcttcctcccagacctacaccaatgtcaaatacccacaacactgtccag
tcggacctggagcgacatcagctgacccatttaacgccccccgccaacagtcacggtata
cctacctctttttctcagggtgccaatctcggctctgctgcactaaataaacatcaacga
accaagtccagccctgagcaactcgacaaaacgtaccttccggctctgtctcctgccgaa
gccagtcgacgtctcatcgcttccgaatctatgaacgatctgtcacgatcgaaatttggc
cgacatagcggcatcgatttggatgatccacctcgtattacaccgccaggcactccgcca
cctccttatcctcagtcctccggatcgacctctgatcacggatcctcgacgataaacgat
agcatcggcgaaagttttgtaacagtttcgcctgtcaaacaagctgtactaaatgagaac
agccctggtttaccgccgattcagcagccaatcatgtccatggaggatgacgatatgagc
gaccaagaagtgggccaactcgaagatcatggtcctttcaagtccctctcgagactctgg
gagcatcacgcccatctcgctgtttttatcaactacgttctctccaacagcgatccttcc
agcctgttattctacctaataacagacttgtacaaggagggaaatgctaaagagatgaga
aagtgggcctacgaaatacactcgagctttctggtacccggtgcgcctctgagattgaat
aatgttgacgaaaatgtggcgagggagatagacgacgttttattaaaagaatctgacaaa
gaggaaatattgcgaaagatattctggaaagcgagagctcgagcaaaagaagaactaaac
gaacagctggcagattttcaacagaaacgaaccgccggattgggaactttgttcggacca
agcgatgctcagctggacgaaagtacaaacgataaagcgagagaggcgcaggtcatcgac
accttccttttgccgaaaatggagccctacctggaagacactgagaaggagcgggacgat
tctcgcgagttcacaacggccgcgggtctcgctaccatattgacgaaaatcttccaagta
cgagccgccactttagatcgatttccaaccttcgtttccaaagacaagtcgaacttcaag
gcccggcttctcactgggaaaacgaggaaactcaccgttcggggacaccactttgtcgtt
catcagtactttacagtcacgtattgcaatcactgtcaacttattatttggggagtcggt
cctcagggttatcagtgcagcgattgctcgctaaacgtgcatcgtcagtgcgttcatgtc
gtcgacgaaaattgtccgggtcccttggtggtcaggaaagaaaaaggtgatcgcatcagt
aaatttatgggcataattcgacctgagcgaaaaccaccatcgtcgcatcatcatctctcc
cagcatttttcacacaatctcgatcgaattaaaaaatccgaagacgacagcggagttctg
acggatggcgaaaacggagatcaccgaggcggtggattcggaaccggaagcgctggcggt
aacagcgagcgaggacgaggcggttccggttacggaacgggggcggaacacgccgaaagt
atggacgacccttcgtcgagggaagacatcgcggaaatgttgcagcaaaatattcccagt
aagccaaagacatcaactataaacaggtctgaaagttacaaggagcagcggttacaccat
aagcgacatcagcgtgagaaacggaaaaccagcgacccgaatctctccaagacaaaggct
ggtttcagtgactgcgaggcgacgggaacgtttcctggtaattcggcgggcagctcatcc
accagcagcttgtcgacgaggagtctagatagcctgagcaccagcttggaacatgtccac
cccgccgcaacttcggccaacacgaccgcctcctgggatagcgacgtcgacgttgaggca
gatcctccggactggagccaaggcgtcgctgaagatgttcttgcacgtcttaccaactcc
gagaagaagagacaagaagtcataaacgaattatttcacacagagcgatcgcacgtcaga
gcgctgagggtcctttcgcacgtattccacaagcctatggtagagtctcaggttttaccg
caggagcaaattcttcttctgttctcgaacctggacgagatgttggaaattcattctggc
ttcaaccaggcgatgaagagcaagaagaaagagaatccttgcgtcggtgacgtgggcgac
ctacttctcggcatgttcgacggtccggccggcgaagcgttcgagcgagcggcgtcgacg
tattgcgcaaagcagcaggtcgccttagacgcgcttagggatcgtcgcaagaaggatccg
aagcttcacgccttcctcaacgaagtggaggcgaatccattgtgccggagacttcagctc
aaggatcacattctgaccggaatgcttaggctgacaaagtatcctctcttgttcgaaaat
ttggctaaatacacgccggccagcaacgagaaggagaaggctgcggtgcttcggagtctt
gagaggagcaaagaggttttaaatcaagtcaatcaagcggttagagtcgcggaggactac
catcgccttgccgagatacagaggaccatggatcgctcggctttcgataagttcgatcac
tcgacggttaacgagttcagaaatctcgacattaccaagagaaaactcatatacgaaggc
ccgctgcagtggagaatggttaatcgtgcgaagcccgtcgatctacacgtcgttctgctc
gacgacacgatactcctgcttcacagacaggacgagaagtatttactcaagtttataaac
acgaatcaggtgaactcggttctaagcccgatcgtcaaagtttctaccgtccttgtgagg
cacaatgctgtcgacaaaaattccctctatttggtaaacacgtctcagagcggtgcccag
atctacgaactagtcgccaattcacccgccgaaagaaaactctggttcaagcacattacc
gaggcttgcgaggcattcaaaactcgcgatcgcgaaggcagaagaccgccgcatcccgtt
ccacctgtcgaagaacccacgcctctagtccaagacacgtcgaccgctgagaatgaggct
aacagcagtaagggagaccaggaagaacctcaacccgacgaagttacgcctgaggaacct
gcgaccagcgtcgaacgtcgagaagaggaagaaaactcgagtgcagcagttgaagcgccg
accgaaactgaaaagcccgatcaacccgaggagccggagcaggaacggcaaaccgagaca
actgagcaacctcagcaagctgatcgagattctgttaacacgagcgttgcgactggtgcg
tgcggagatcccttgcgattagtcacctgcactcagtcatccctcatagaaccggatgaa
gtacgagttgaggtgcggcccatacatctggctgagccagttctcacgccaatcgaacgt
ctacggcgtaaagatgctcttatcaaagaagccttgatggaaaagcaggccttggtggcc
gacattttaaacgtccccagagaagacttcgaacatctcgctgatatggcctcggaacca
tccccaattcaaaaggagcctaccgaattaatacttgctgctgttagccaggcgaatcaa
ttaatggaaatgcttaactcctcattgaatgtgaccgaaactgagacggtactcgcatct
cggggagcttccgtttcggcggttggaagttgcgaagcacctggttgtccagcacctcga
ccacactcgctttcccatcacccgtcgataccagtcgcaagcttacaacccgtttgcagc
tcactggcttctcaactctcgcaacttctggaaattatcaaagacagagaagaagaacgt
gagagaatgagacgcgaactacggaggagtagggaaaagctccacgctatagacgcagac
gtccaaagacgtggcgtattgcaaaatttaaacacctccactcatacccaaaccgatccc
agtgaatctttgaacggcgaagggtttgtggaacttaatttagatgaatttgtcgatgcc
tttagtgacccggaaccggatctcgactcaacacaggcactgggagaacaccgattaacg
gaagttgacgttgaggaaaacccgcacggggttggagatagcgtgggttga
DBGET
integrated database retrieval system
