Neodiprion pinetum (white pine sawfly): 124223540
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Entry
124223540 CDS
T08966
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124223540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
npt04990
]
124223540
Domain-containing proteins not elsewhere classified [BR:
npt04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
124223540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
TSP1_spondin
ADAMTS_CR_3
PLAC
Motif
Other DBs
NCBI-GeneID:
124223540
NCBI-ProteinID:
XP_046491552
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Position
7:complement(20640472..20741307)
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AA seq
901 aa
AA seq
DB search
MEETTAMMTMISDRSKIRTMLFAHIGLVILSSIVWQTVNCDEYRNYPIQVHQMFQEKMLR
SSENMERVRGNWGSWAAWSDCSRSCGTGIQSQARDCVPMRGYLRKRSIASIEGQRSEIKP
FCIGTYKRYHVCNTQECPDFGDIRAEQCGKYNGKFYKGQSYQWEPFPDAPNDCALNCRAV
GERFYATLEPAVLDGTPCRGNPRRRSRVPRVLAVGAADRWLCVGGQCKSVGCDGVVGSGR
VYDACGVCGGEGNSCRLFEGIFLEPKLSAGHQLVTTIPKGAISINITEIRPSKNALALRG
ANGNFILNAPSPSSLLSSSGAYEGAGTVFSYRRGNLMHAENIWTEGPLEEPVDLMILSEE
LNPGILYKYMLPVEEKFEDIAMLAPPVLVTGPNEKIGNEIPEHSAHVVTPPMDPNMTKSE
GGKDAASDRLDDEAVDKRNSNQSNAIGKMAGDQPMQKKLIGKDERNRKKNRKKKKFFWKI
ASLSPCSKACGGGVQYATFKCFRESTQATAPERRCKNVARPPSPPPLRCNTLPCPARWRA
GPWSQCSVTCGTGIQTRKLECVQELNPKLTMRVASGACIEKPDLKTTTQCRLTSCIFPRA
PPEARQMHPQVEAIPKESHWTTGNWGECSSTCGPAIRKREVICITAGSTTCPDETRPANK
TTCDSLPECNRIPAQNAPWLYTDWSSQCSAECGIGLRTRQIVCSDVNEVFCDASKKPNLV
QSCTGNGTHCDRMRYQWFVGAWSPCTVSCGPGSQHRDVACLASKGGDLKIVGETNCRELT
RPETDQRCLRPPCPVEWFTSDWSECTQSCGAGTQSRVVRCLFEGVPTTGCAKSSEPKSRR
TCEKQPCKSKANFDIPPKPPKKVHEKSDCVDKYPNCSLVLKARLCRIKYYKHSCCGCRDH
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaacagcgatgatgacgatgataagcgatcgctcgaagattcgcacgatg
ctattcgcgcatattggattggtcatcctgtcttcgatcgtttggcaaacggtcaattgc
gacgagtacagaaattatccaattcaggtgcatcagatgtttcaagaaaaaatgcttcgc
agttcggaaaacatggaacgagtcagagggaattggggaagctgggctgcgtggtcagat
tgttctcgatcctgtgggaccgggatacagtcgcaggctagagattgcgttccgatgcgg
ggttatttgcggaaacgcagcatcgccagtatcgagggtcagagatcggaaatcaagccg
ttttgcatcgggacttacaaacgatatcacgtctgcaatactcaggagtgtccagatttt
ggggatatcagagctgaacaatgcggcaagtacaacggaaaattttacaaggggcagagt
tatcagtgggaaccatttcctgatgctccgaacgactgcgcgttgaactgccgggctgta
ggagagcgattttacgccaccctggaaccggccgtcctggacgggacgccgtgtagagga
aacccacgacgacgctcccgggttcccagagtccttgccgtaggcgccgccgatcgttgg
ctctgtgtcgggggccagtgcaagtcggttggatgtgacggtgtcgttggttcgggtcga
gtctatgacgcctgcggtgtttgcggaggtgaaggaaacagctgtcgacttttcgaaggt
atttttttagagccaaaattatcggccggtcatcagctcgtgacgaccattccaaaggga
gcaatttcgataaacatcacggagattcggccgtctaaaaacgctctagcattgagaggc
gcgaatggcaacttcatactcaacgctccgtctccgtcgtccttactgagttcgtctgga
gcttacgaaggtgccgggactgttttttcatatcgtcgtggaaacctgatgcatgccgaa
aatatttggaccgaaggtccactcgaagagcccgtagacctaatgattttatccgaagaa
ttgaatccagggatattgtataaatatatgctgccggttgaggagaaatttgaagacatc
gcgatgctggcaccgcctgtactcgttactggtcccaatgagaaaatcggcaacgaaatt
ccggaacattctgcccacgtggtgacgccgccaatggatcccaatatgaccaagtccgaa
ggtggtaaggatgctgcttcggatcgtctagacgacgaggccgttgataaaaggaactcg
aatcaatctaacgcgataggaaaaatggccggcgatcaaccgatgcagaaaaaattgatt
ggcaaggatgaacgaaataggaagaagaacaggaagaagaaaaagttcttctggaaaata
gcctcattgtctccttgctccaaggcctgtggcggcggcgtgcaatacgcaacgttcaaa
tgcttccgagaaagcacgcaggcaacggcgcccgaaagaagatgcaaaaacgttgctcga
ccaccttctccaccgcctttaaggtgcaacacgctgccgtgtcccgcaagatggcgagcc
ggtccgtggagtcagtgttcggtgacttgcggcaccggaattcagacccgaaagctcgaa
tgcgttcaggagttgaaccccaagttgacaatgcgcgttgcttccggtgcttgcattgag
aaacccgatttaaaaacgaccactcagtgcaggctaacttcctgcatatttcctcgggct
cctcctgaggcgagacaaatgcatccgcaggtcgaagccatcccgaaggaatcccattgg
acgaccggaaattggggagaatgttcgagcacctgtggtccggcgattcgtaaacgagag
gtgatatgcataacagcaggatcgacaacctgccccgatgaaacaagacccgcgaacaaa
acaacttgcgattctttacccgagtgcaacaggatccctgctcaaaatgcgccctggctg
tacacagactggtcgtctcagtgttccgccgagtgcggaatcggtttgcgaactcgtcaa
atcgtctgtagtgacgttaacgaggtgttttgcgacgcctcgaaaaaaccaaaccttgtc
caatcttgtaccggaaatggtacacactgtgaccggatgcggtatcagtggttcgttgga
gcttggagtccgtgcaccgttagctgcggtcccggttctcagcatcgcgacgtggcttgc
ctagcgtcaaagggtggcgatttgaaaatcgtcggggaaacaaattgtcgcgaattgacg
cggcctgaaacagatcagagatgcctaaggccgccgtgtcccgtagaatggttcacatcc
gactggtccgagtgcacccagagctgtggggccggcacgcagagccgagttgttcgttgc
cttttcgaaggagttccgaccaccggttgtgcaaaatctagcgaaccaaagtctcgaaga
acgtgcgaaaagcaaccatgcaaatcgaaggccaatttcgacattccgccgaaaccaccg
aaaaaggttcacgaaaagtccgactgcgttgacaaatatccaaattgtagtctggtcttg
aaggctcgattgtgtcgaataaagtactacaagcattcctgctgcggctgccgcgaccat
ctatga
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