Neodiprion pinetum (white pine sawfly): 124223918
Help
Entry
124223918 CDS
T08966
Symbol
pic
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03420
Nucleotide excision repair
npt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124223918 (pic)
09124 Replication and repair
03420 Nucleotide excision repair
124223918 (pic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124223918 (pic)
03400 DNA repair and recombination proteins [BR:
npt03400
]
124223918 (pic)
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
124223918 (pic)
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124223918 (pic)
TCR (transcription coupled repair) factors
Cul4-CSA complex
124223918 (pic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
124223918
NCBI-ProteinID:
XP_046492260
LinkDB
All DBs
Position
7:complement(1309454..1316945)
Genome browser
AA seq
1140 aa
AA seq
DB search
MKIMAHHYVVTAQKPTAVTACVTGNFTSPTDLNLILAKNMRLEIHLVTPEGLRPLKEVGI
YGKIAVIKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASE
TGIKAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEELQVQDVNFLHGCSNPT
LILIYQDINGRHVKTHEISLRDKEFVKIPWKQDNVEREAMMVIPVPSPICGAIIIGQESI
LYHDGTTYVAVVPPVIKQSTITCYTKVDNQGLRYLLGDMAGHLFMLFLEQEKKADGTMVV
KDLKVEVLGEISIPECITYLDNGVIFIGSRLGDSQLVKLVTKADENGSYCVPIEIFTNLA
PIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKMGG
SSCDNTLVLSFVGQTRILTLNDEEVEETEIPGFVSDEQTFHTGNVTAETFIQITPTSARL
ITNTANPIVSEWKPENNRTISVVACNGTQVLCATGNDLFYMEIVSSQIVPKGSVALQHEV
ACLDISPLDGNLEAKIVAVGLWTDISVRILTLPDLEEMNKELLGGEIIPRSILMTCFEGN
TYLLCALGDGSMYYFTLQKQNGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNHMCSLNAEAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGE
SPRRIAYQETSQTFGVITMRVDMQESSGVSIVRSSASTQVASTSSSSHIASHNKPGHTAS
DIGQEIEVHNLLIIDQHTFEVLHAHTLRPTEYAMSLISTKLGEDPTSYFVVGTAFINPDE
SEPKTGRILLYHWNDGKLTQVTEKEIKGACYSLVEFNGKLLASINSTVRLFEWTAEKELR
LECSHFNNIIALFLKTKGDFVLVGDLMRSLTLLQYKTLEGSFEEIARDYSPNWMTSIEIL
DDDTFLGAENCFNLFVCQKDSAATSEEERQQMQEVGQFHLGDMVNVFRHGSLVMQHLGES
STPTQGCVLFGTVGGAIGLVTQIPSGFYDFLHNLEDRLTTVIKSVGKIEHSFWRSFNTDL
KMEPCEGFVDGDLIESFLDLSRDKMAEVAMGLQIDDGSGMKKDATVDDLVKIVEDLTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatggcccatcactacgtagttacggcccaaaagccaactgcggtaacggct
tgcgtgaccggtaacttcacatctccgaccgacctcaacctcattctggcaaagaatatg
cggctcgagatccacctcgtcacccccgagggtctgcgacccctcaaagaagtcgggatc
tacggaaaaatcgccgtaatcaagttcttcagaccgccgcacgagaagaaggatttgcta
tttctcctgacaactcgatacaacgccatgatactcgaatgcataggcgaaggcgaagac
atagagataataacaaaggcacatgggaacgtagcggacagaattgggaaggcttcagaa
acaggaataaaggcggtgatagacccaaaggcacgagtaataggactgagactctatgat
ggattattcaagataatacctctggacaaggacaacccagagcttaaggcatcttcgatt
agaatggaggaactgcaagttcaggacgtaaattttctgcacggctgctcaaacccaacg
ttgattctaatctatcaggacataaatgggcggcatgtcaaaactcacgagatatcgctg
agagacaaagagttcgtaaaaataccctggaaacaggataacgtcgaacgagaagctatg
atggtgattccggtcccctcgcccatttgcggtgcgatcataatcggccaggagagcatc
ctctaccatgacgggacaacgtacgtcgcggtagttccgccggtaataaaacagagtaca
atcacgtgctacaccaaggtcgacaaccaggggcttcggtatctactaggagacatggca
gggcatttgttcatgctgttcttagagcaagagaaaaaggctgacgggacaatggttgtc
aaggacttgaaagtcgaggtactaggtgagattagcatccccgagtgcatcacttacctc
gacaatggtgtcattttcatcggcagccgtctaggtgactcgcagctcgtcaagctggtc
acaaaggcagatgagaacggctcctactgcgtgccgatagagatattcaccaacttagcg
ccaatcgtcgacatggctgtcgtagacctggagcggcagggccagggacaaatggtcacg
tgttcgggtgccttcaaagagggatctctgaggataataaggaacggaattggtattcag
gagcacgctagcatagatctgcctggcataaagggcatgtgggcactgaagatggggggg
agcagttgcgacaataccttggtgctttcatttgtcgggcagacacggatactgacactg
aatgacgaggaggtggaagagaccgagattcctggcttcgtttccgacgaacagaccttc
cacacaggcaatgtgacggccgagactttcatccagataacgccgacctccgccaggctg
attaccaacaccgcaaatcccattgtgtccgagtggaagcccgagaacaacaggaccatt
agcgttgtcgcgtgcaatggtacgcaggtcctctgcgccactggaaatgatttgttttac
atggaaatagtgtcctctcagatcgtcccaaaagggtcagtcgctctgcagcacgaggtt
gcctgtctggacatttccccgctggacggaaacttagaggctaagatcgtggctgtcgga
ctgtggactgacatatcggtgagaattctcaccctgccggacctcgaggaaatgaacaaa
gagctcctaggtggggaaataatccccagatcgatcctgatgacctgcttcgagggaaac
acctatctgctatgcgcgctaggtgacggcagcatgtactactttacgcttcaaaaacag
aacggtattctgtccgacaagaagaaggtcaccctcggcacacagcccacggtcctgagg
acattcagatccctttcgacgactaacgtgttcgcctgctctgaccgtcccacggtgata
tattcttcgaaccacaagctagtcttcagcaacgtcaacctgaaggaggtgaaccatatg
tgttcgctcaacgccgaggcttacccagacagtctagccctggccacggacagcactgtt
acaatcggtacgatagatgaaatccagaagctccacataagaacggtgccactcggcgag
tcaccaagaaggatcgcgtaccaggagacttcgcagactttcggtgttatcacgatgcgg
gtagacatgcaggagagcagcggtgtcagcattgtcagatcgtccgcatccacacaggtt
gcgtcaacgtccagtagcagccacatagcgtcgcacaacaagcctggacacacggccagt
gacattgggcaggagatagaggtccataatctactgataatcgaccaacacactttcgaa
gttctccatgctcacacgctgaggccgaccgaatacgcaatgtcactgatatcaacgaag
ctcggtgaggacccgacttcgtacttcgtcgttggtaccgccttcatcaatccagacgag
tccgagccaaagacaggaaggatactgttgtaccactggaacgatggcaagctgacgcag
gtcacggagaaggagataaaaggcgcttgctactcactggttgaattcaacggcaagttg
ttggccagcatcaacagcaccgtaagattgttcgagtggaccgccgagaaggagctcaga
ctggagtgcagccacttcaacaacatcatcgcgctcttcctcaagaccaaaggggacttt
gtgctcgtcggcgatctaatgcgctcgctgacattgcttcagtacaaaacgctagaaggc
agttttgaagagatagctagagactacagtcccaactggatgacaagcatcgagatacta
gacgacgacactttcctaggagctgagaactgcttcaatttgttcgtctgccagaaagac
agtgcagctacgtctgaggaggagaggcagcagatgcaggaagtcggacagttccacttg
ggcgatatggtgaacgtctttagacacggttccctggtcatgcagcacctgggagaatcc
agcacaccgactcagggctgtgtcctgttcggaacggtgggcggcgccattggtcttgtt
actcagattccatcaggcttctacgattttctgcacaatttggaagatcgtttgacgacg
gttataaaaagtgttggtaaaatagagcatagtttctggaggagcttcaacacagatttg
aagatggaaccctgcgagggctttgtcgatggtgatctaatcgaaagcttcctcgacctg
agccgcgataaaatggccgaagttgccatgggcctccagatcgacgacggcagcggaatg
aaaaaagacgcgacggtggacgatctcgtgaaaatcgtagaagacctaacgaggatacac
tag
DBGET
integrated database retrieval system
