Neodiprion pinetum (white pine sawfly): 124223926
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Entry
124223926 CDS
T08966
Symbol
spas
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124223926 (spas)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npt04812
]
124223926 (spas)
Enzymes [BR:
npt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124223926 (spas)
Membrane trafficking [BR:
npt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124223926 (spas)
Cytoskeleton proteins [BR:
npt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124223926 (spas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
AAA_5
AAA_16
AAA_22
TIP49
IstB_IS21
NPHP3_N
AAA_14
Mg_chelatase
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124223926
NCBI-ProteinID:
XP_046492285
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All DBs
Position
7:1212084..1221145
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AA seq
740 aa
AA seq
DB search
MSYSDGGRSIRKSSTKSPKKLRVIKNGDSDKVTTTTISYHHHHHHHSEGHGPHPSIHKRN
LYVVSFPLIFLFNVLRTLLYQLFVIFKYFYTSTSRLFLRRSTANIAHGKKSLKANCHLEI
VVGQQDADGTEKDNLLSVVDPEAEQMSQIPRRTAGPGPGDPLLAKQKHHHRRAFEFISKA
LKIDEENEGHKEMAIELYKKGIGELEKGIAVECNGGRGEVWERAQKLHDKMRANLAMAKD
RLDFLASLCELKRLGITNKGGCAEDADRASERGENHPRLRQRLGPQATQTNKNPTTTTPH
NSNNHSHHPQISSNNYLSSTGAHSQTLHVPGQNTYKYIQRPRSPKNHSARLPEASGRKLA
VPGKRVVGSVISKSQTLPRSMGRSAPTLPCHRTMPIKPSSTPPSVKRQFSVPSNGSPVRR
PGTPGGSGSNRGTPTRKASMPKGIDPKLAQVILDEILEGGTAVQWEDIAGQETAKQALQE
MVILPSLRPELFTGLRTPSRGLLLFGPPGNGKTLLARAVATQCNATFFSISAASLTSKYV
GEGEKLVRALFTIARELQPSVIFIDEVDSLLSERRDNEHEASRRLKTEFLVEFDGLPCTP
EERVLVMAATNRPQELDEAALRRFTKRVYVTLPDTLTRVLLLRRLLSKHSNPLTQQELEH
LARLTEGYSGSDLTGLAKDAALGPIRELNPEQVKELDLNLVRNITMQDFVDSLKRIRRSV
SPTSLAAYEKWSLEYGDVSL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacagcgatggcgggcgttcgatccgcaagtcgagtacgaagtcgccgaaaaaa
ttgcgagtgataaagaacggcgacagcgacaaggtgacaacgacgacgataagctaccac
caccaccaccatcaccactcggagggccacggccctcacccttcgattcacaagcggaat
ttgtacgtcgtctcgttccccctgatattcctcttcaacgttctgcgcactttgctctac
cagctattcgtgatattcaagtacttctacacgtcgacctcgcggctattcctcaggcgt
agcaccgccaatatcgcccacggcaaaaagagcctcaaggccaactgtcacctcgagatt
gtcgtcggtcagcaggacgctgacggaaccgagaaagataacctcctcagcgtcgtcgac
cccgaggctgaacagatgtcccagattccgagacgcaccgctggtcctggacccggtgat
cctctcctcgctaaacagaaacaccaccacaggagggccttcgagttcatcagcaaggcc
ctcaaaatcgatgaggagaacgagggtcataaagaaatggctatcgagctctataaaaag
ggtatcggtgagctggaaaaaggcatagcggtcgaatgcaacggcggacgtggcgaagtc
tgggagagggctcagaaattgcacgacaaaatgcgtgctaatctcgccatggctaaggat
cggttggatttcctagccagtttgtgcgagctgaaaagactgggaataacgaacaaagga
ggctgcgccgaagacgcagatcgagctagtgaacgtggcgaaaatcatccaaggctaaga
caacgcctcgggccccaagcaacgcaaacaaataaaaaccccaccaccaccactcctcac
aacagcaacaatcacagccaccatccacaaattagttctaataattatctctctagtacc
ggggcacattcgcagacgttacatgtacctggtcaaaacacatacaaatacatacaaagg
ccgcgatctccaaaaaatcattccgctcgactgcctgaagcgtctggtagaaaactggcg
gtgcctggaaagcgggtggttggatcagtgatcagcaagagtcagacgctgccacgtagc
atgggaagatcggcgccgactctaccttgccatcgtacgatgccgataaagccatcctcg
accccgccatcagtgaaacgacaattctctgtgccgagtaacgggtcgcctgtgagaaga
cccggaactcctggggggtcaggaagcaacagaggaacgccaacgcgaaaggcatccatg
ccgaaaggcatcgacccgaaattggcccaggtgatcctggacgaaatcctagagggcgga
accgctgttcagtgggaagacatcgcgggtcaagagaccgccaagcaagcgctgcaggaa
atggtgatcctgccctcattgcgtccggaactttttaccggtctccgcacgccatccaga
ggactcctgctgttcggcccaccaggcaatgggaagacgctgttggcgagggcggtagca
acgcagtgcaacgcgaccttcttctcgatatcggcggcgagtctgacttccaagtacgtg
ggggagggtgagaagctggtcagagcgctgttcacaatagctagggagcttcagccgtcc
gtgatattcatcgacgaggttgactcgctgctcagtgagcggcgggataacgagcacgaa
gcctcgaggcggttaaagaccgagtttctcgtcgaattcgacggtctgccttgcacccct
gaggagcgcgtccttgtcatggccgctaccaacagaccccaagaattggatgaagccgct
ctcaggcggttcaccaaaagggtctacgtcacgttgcccgatacactgacgagggttctg
cttctcaggaggcttctcagcaagcatagtaaccccctcactcagcaagaacttgagcac
cttgcgcgactcaccgagggatattctggtagcgatctgactggtctggccaaagacgct
gcgctgggacccataagagagctgaatccggaacaagtgaaagagctagacttaaactta
gtgcgtaacataacgatgcaggatttcgtcgattctttgaaaagaattcgtagatctgta
tcgccgactagtttagccgcttacgaaaaatggagtttggaatacggcgacgttagtctc
tga
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