Neodiprion pinetum (white pine sawfly): 124224647
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Entry
124224647 CDS
T08966
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124224647 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124224647 (SF1)
Spliceosome [BR:
npt03041
]
Complex A
Other components
Complex A specific factors
124224647 (SF1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
124224647
NCBI-ProteinID:
XP_046492624
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Position
1:complement(2590502..2598844)
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AA seq
608 aa
AA seq
DB search
MNQSRNFTSLLNPSYLQNAQNAAAANAAAAAAAAAAAVSAAIANGTSLSSSSSSQSRKRE
AESDGKSDKESREERRKRRKTRWGGSEHDKTFIPGMPTVLPTNLTPEQEQAYLFQLQIEE
ISRKLRTGDLGIPPNPEERSPSPEPIYSSDGKRLNTREYRTRRKLEEERHNLIQKILKIN
PEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLIGPRGNTLKSMEKETGAKIIIRGK
GSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKKAVERIHEIIRQGVEVPEGQNDLR
RNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPDKPNVTNNIVCSSCGGAGHIARDC
RSKRPGQGGPAAAGMTGITPGGDKAKIDEEYMSLMAELGEGPPPDRSKGHQRSQNTNYPG
LFDRQQAPRALMAAPAHPPPQMMQGGPMMPPPGMAPPPWTQNDVNSMNGMNMQWQPPVSM
PPPPGVMQPPPPPPGSTTQPNIPPLMPWMTANNQPPPPGQMPPSQMPPGMGGMPPWQQGQ
QSPMRPPPPGTAPPPGYPGWQQQTLSGWPPAAPVPPPPQQPAPAPPGIDLNSLPTLLAQP
PPPPPPTS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtctcggaatttcacgtccctgttgaatccaagttatttacaaaatgcgcaa
aatgccgctgcggcaaacgcggccgccgcagcagccgctgcagctgctgctgtgtctgcg
gctatcgccaacgggacttcgttaagctccagcagttcgtcccagagtagaaagcgggaa
gctgaaagcgatggaaaatcagacaaggagtccagagaggaacggcgtaagcgaaggaag
accagatggggaggtagcgaacacgacaagacattcattccagggatgccgacggttctc
ccgactaatcttaccccagaacaggagcaggcttacctctttcagctgcagattgaggaa
atcagcaggaaactccgtactggcgaccttggaataccgccaaaccccgaagaaaggtcc
ccatctccggagccgatttacagtagcgatggtaagcgcttgaacacccgcgaatatcga
actcgacgaaaattggaggaggaaaggcacaatcttattcagaagatactgaaaattaat
cctgagttcaaaccgccaccagattacaagccaccaataatccgtgtacatgataaagtt
atgattccacaagaggagcatccggacataaactttgtcggtttgcttattggaccacgt
gggaatactttgaaatcaatggaaaaagaaaccggcgccaagattattattcgtggaaag
ggttcagtaaaagaaggtaaagttggtagaaaagatggtcagcctttgccaggagaggac
gaaccgttgcatgcgtacattactgcgaacaatcttgatgctgtgaagaaagcagttgaa
aggattcatgaaataattagacaaggagttgaagtacctgagggccagaacgatttacgt
cgcaatcaattacgcgaattagcattgctgaatggaacacttcgagagaatgacggacct
cgatgtacgaactgtggcgcaagcgaccacaaatcttggctgtgtcctgacaaacccaat
gttaccaataacatcgtatgctcgagttgcggaggcgcgggacatatagcgcgagattgt
cgatcaaaacgacctggtcaaggtggtccagcagctgctggaatgactggaatcacccca
ggtggcgataaagcaaagattgacgaggaatacatgtcactaatggctgagctcggcgag
ggtccacccccagatcgatccaagggacatcaacgctcccaaaacacaaattatccgggt
ctattcgatagacaacaagcgcctcgtgctttgatggcagctccggcacatccaccgccg
cagatgatgcaaggcggtccaatgatgcctccaccaggcatggcgccgcctccctggacc
cagaacgatgtgaacagcatgaatggtatgaatatgcagtggcaacctccggtcagcatg
cctccgcctccaggtgtgatgcagccgccacctccgccccccggctcaaccacgcaaccc
aatattccaccgttgatgccgtggatgactgcaaacaaccagcctccaccgcccggccaa
atgccaccaagccaaatgcccccgggaatgggaggaatgccaccgtggcaacaagggcaa
caaagtccgatgcgtcctccgcctcctggaacagctccacctcctggatatccgggatgg
cagcagcaaaccctgagcggatggccgccagcagcccctgtacctccgccacctcagcaa
ccggcacctgcaccgccgggtatcgatttgaacagcttaccgacattgttggcgcaaccg
ccgccgccacctccgccaaccagttag
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