Neodiprion pinetum (white pine sawfly): 124224701
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Entry
124224701 CDS
T08966
Symbol
smo
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04341
Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
124224701 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
npt04030
]
124224701 (smo)
G protein-coupled receptors [BR:
npt04030
]
Frizzled / Smoothened family
124224701 (smo)
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
124224701
NCBI-ProteinID:
XP_046492782
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Position
1:complement(28881436..28888754)
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AA seq
976 aa
AA seq
DB search
MLQLAFLIMAVFYGVGSELSRNFLSVANGNNETWNGIEIGRSGLRHEDQSFLMDVYTSAE
SANCRKAAKCIDISNNTLCMGTRLTYSTTTLDLIPDSTLEGSIQENLNQFRGLMHIPKCW
AVVQPFLCSIFMPKCINGIVDLPSQEKCKMVSGPCRLLFNHTIWPSFIRCENAELFPKMC
KNDVRDLKFNTSGKCLKPLIHTDNSLSIFDGIEGCGTQCSDPLFTPDEQRQIHSFVAWAA
ATCLLFNLFTVVTFLIDWRSANKYPALVIFYINSCFMVSCVGWLAQFGPGSRDVIVCRKD
GTLRMSEPSGENLSCVVVFVLVYYFLMAAMVWFVIFTYAWHMSFQALGKIQDRIDKKGAY
FHLIAWCLPLVLTVTIMALGEIDGNSVTGICFVGYANHAVRAWFLLGPICIVLLVGGYFL
SRGLITLIHLKISSQEVISKRASSKIRETIVRLGLFSIFTFVAVIVTFYCHIHEFQHSWE
WKQSFRDYMICTITTKYTAGVSECKMTSRPSAAKLQLHLLSPFFAGVLMSSWVWTGSTVD
TWKRFLRRTFNCEAEEQIIPKKYKAIAQAYEKRNTFKNAGRLSISFHNTHEDPVGLNFEL
NSVASQDFSSTWAAALPKLVTRRGALVGVTTGSVSSNRRNSVDSEISFSVRRVSVESRRN
SLDSQISVQIAELKTTRKVASTTLPGNSRSRRGKRRRRDFNKTRSGKVKPLFRRGSTTSQ
ESELGAQILSALTIGGNPNIPPLQMPNMKRRSASAGLDGQAINSKMLDGKNAGMILPFLF
PGQSESDENLSSEEKGSRINPRKDIDVEACNVDKEEQDSESEDSHAEENTKMISVEEPPE
RSKSKSSNNSTKSYIHDSSGRRKELKVKDMEVELKDMYRKGDLVSSLTSFCPELSRLIQS
DDSKTKLTKRQSDDANIQSNAREMATQTSLPLDILEMEELKQSIDEIINSRNCSSKGTQI
SPQLNKTANRKSSDIR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcttgcctttttgataatggcagtattctatggagttggatcagaactaagc
cggaactttttgtctgttgccaatggtaataatgaaacctggaatggaatagagattgga
aggtcagggctcagacatgaagaccagagtttcttgatggatgtatatacaagtgcagag
tctgcaaattgtagaaaagcggcaaagtgtattgatatcagcaacaatactttgtgcatg
ggtactagattgacgtattcaactactacgttagacctcatccctgattctaccttagaa
ggaagtatacaggagaacttgaaccaattccgtggtcttatgcacattccaaaatgctgg
gcagtagttcaaccatttttgtgttcaatctttatgccaaaatgcatcaatggcattgta
gatttgccttcgcaagagaagtgcaaaatggtctctggcccatgccgtttattgtttaat
cacacaatctggccaagtttcatcagatgtgaaaatgcagaactttttccaaaaatgtgt
aaaaacgatgtcagagatttgaaattcaacacttccggtaaatgcctgaagccacttata
cacacagacaattcactatcaattttcgacggtattgaagggtgcggcactcagtgcagc
gatccacttttcacaccggacgaacagcgtcaaatccattcctttgtcgcatgggctgct
gcaacctgcctactgttcaatttgtttaccgtggtcacatttttgattgactggaggagt
gctaacaaatacccagctttagtaatattctacatcaacagctgtttcatggtatcgtgt
gtagggtggctggcacagttcggtcctggtagcagagatgttattgtttgccgaaaagat
ggcactttaagaatgagtgaaccaagcggtgagaacttatcctgcgtggtggtatttgtt
ctcgtttactattttctgatggcagctatggtttggtttgttatctttacgtacgcatgg
catatgagttttcaagctcttggaaagatccaggacagaattgataaaaaaggagcttat
tttcatctcatcgcttggtgtcttccgctagtattgacagtcacaattatggctctggga
gaaatagatggaaacagtgttactggaatatgttttgtgggctatgcaaatcacgctgtg
agagcgtggtttttattgggacctatttgcattgtactacttgttgggggatatttctta
tcaagaggattgataacgttaattcatctgaagataagcagtcaggaagtaatatctaag
cgagctagctccaaaattcgagaaacaattgtgagattgggattattttcgatatttacc
tttgtggcagtaatagtaacattttattgtcacatccatgaattccaacactcgtgggaa
tggaaacaaagcttccgagattatatgatctgcactattacaacgaaatataccgcagga
gtatcagaatgtaaaatgacatcaagacccagcgcggccaagcttcaattacatttatta
tcgccattctttgctggtgttttaatgtcttcttgggtttggacgggatcaactgtggat
acctggaaaagatttcttagacgaactttcaactgtgaggcagaagaacaaattatacca
aaaaagtacaaagcaattgctcaagcctatgaaaagagaaatacatttaaaaatgctgga
cgattatctataagcttccacaacacacatgaagatccagttggtctaaattttgaacta
aattcagtagcctctcaagacttcagttcaacgtgggcagctgcattaccaaagctggtg
acaagaaggggtgctttagttggtgtaacaacaggatctgtatcgagcaaccgacggaat
tccgttgactcagaaattagttttagcgttcgtcgtgtgtctgtagagtcccgaagaaat
tcattggattcccaaatctctgtacaaatagcagaacttaagacaactagaaaagtagct
tccactacgttacctggtaattctcgtagcaggcgaggaaaacgtaggaggcgcgatttc
aacaagacaagatctggaaaagttaaaccactttttcgaagaggtagtacaacatcacag
gagagcgaactgggagcccagattctttcagctttgactattggagggaatcctaacatt
ccgcccttacaaatgccaaacatgaaaagaagatctgccagtgctggcctggatgggcaa
gccataaattcaaaaatgctagatggtaaaaacgcaggcatgatattgccgtttttattc
ccaggacaaagtgagagtgacgaaaacttgagcagtgaagagaaaggttcgcgtattaat
ccacgtaaagacatcgatgtggaagcctgcaatgtggataaagaagagcaggacagtgag
agcgaagatagccatgctgaagaaaatacgaaaatgatatctgttgaagaacctcccgag
cgaagtaaaagtaagtcaagtaacaatagtacaaagagctatattcatgacagtagtggt
cgacgtaaagaactgaaagtaaaagacatggaagtagagctcaaagatatgtacagaaaa
ggtgacctggtatcgagtttgacatctttctgtccggagctctctcgactcatacaatct
gacgattcgaaaacgaagttaacaaagcgtcaaagtgatgatgcaaacattcaatccaat
gccagagagatggctacacaaacttctctccctcttgatattttagagatggaggaatta
aagcaaagtattgatgaaataattaacagtagaaattgtagctctaaagggacacagatt
tccccacaactcaacaaaacagctaatcgtaaatcttctgacatcaggtag
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