Neodiprion pinetum (white pine sawfly): 124224712
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Entry
124224712 CDS
T08966
Symbol
ptc
Name
(RefSeq) protein patched isoform X1
KO
K06225
patched 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04341
Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
124224712 (ptc)
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GFIT
Motif
Pfam:
TRA2_N
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
124224712
NCBI-ProteinID:
XP_046492829
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All DBs
Position
1:complement(39162472..39190943)
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AA seq
1337 aa
AA seq
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MVAPSGPTGILADHPSGSERLHGPAPSQTDRETDLDQPSSNARYAGSTRHRHETDLYVRP
SWTDAAIALDQLEKGKAEGQRSAVWIRALLQDQLSQLGYFLQRHAGKVLFVAILALATFC
VALKSVQVHSRVDQLWVQEGGRLEKEVQYASEALGEAAASTHQLVIQTPKHAGANILHSS
ALKEHLTALRAATQVTVQLFDTSWRLKDMCYAPSVPNYDMHYVDQIFENIIPCAIITPLD
CFWEGSKLLGPEYPVHIPHSKTGVQWTNLNPTEMLEQMKKLPFVFSFKTLEDYMKRSGIT
NGYQSKPCLDPTDKDCPETAPNKKSQQPPDVGAELTGGCYGFAAKYMHWPEELVVGGAKH
NKTGHLTRAAALQTVVQLMGERELYEFWVNTYKVHHIDWSQEKASIVLDTWQRAFSNEIK
KQLKGNGSAPYNLYAFSTTTMNDILGKYSEISVVKIVIGCALMVLYAGLALLRWNDPVRS
QSGVGIAGVMLVCAAVAAGLGFCALLGIPFNAATTQIVPFLALGLGVHDMFLLTHTYAEL
SVNEVRSGEQTGMVLKRTGLSVLLTGLSNVSAFFAAAMIPVPALRVFSLQAAILILFNLA
AMLLIFPAMVSLDLRRRRSGRSDIFCCCLPALKRPTVYSPGSAGCRGNGCGTAKQTVTRA
IPPERRETCTQILSPRSHRNEAWIGGDVKGDAEKQPTEDDSLTGCSKDDCLGFGLSQLAA
RHYAPFVTRPTTKVFGMMLFAGILAGSAWQATRVNDGLELTDLVPQNSDEHGFLAAQAKH
FGFYNMYAVTGRDFEYPNNQRLLYEYHDAFMRVKNVIKNDDGGLPEFWLGLFRDWLKGLQ
AAFDRDYSRGCVVQEEWFKNASDDAILAYKLMVQTGHVDNPIDKTLINQTRLVDSDGIIN
PRAFYNYLSAWASNDAFAYGASQANLRPEPRQWFYTNDPELKIPKSMPLTYAQMPFYLHK
LTDTDQITELIGSVRELCRKFEERGLPNFPSGIPFLYWEQYMGLRGCLGIALLAALGASV
AVVGVLLLNLWAALLVGTSLAGVVLQLLGIMGLCGIKLSAVPAVLLVVSVGIAVHFTVHI
CLSFVTSIGSRDRRVRLALEHMYAPVVHGALTTLLAVMMLGLSEFDFIVRYFFLVLVSLI
GIGLVNGLFFFPILLSLVGPSPEVIPNDHPDRISTPTPPASPIVRRTKPPAPPKRPHKSE
SNRLHAEPSLTTITEEPNSWHSTQESCIIVQPELKVETTSTCGNQNCGGSDTSGSSRTSP
VPSASHITTKVTATANIKVEVHTPLSSGVDRGEKCRHGGVASSRRSSRCSTNVNGGESSG
SEPDSDSNANPTNTYKH
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctccgtccggtccaacggggatcctagcggaccacccttccggttctgaacgg
ttacacgggcccgcgccgtcccaaaccgaccgcgaaacagaccttgaccaaccctcctcg
aatgcgaggtacgccggaagtaccagacacaggcacgaaaccgacctttacgtcaggccc
agctggaccgatgccgcgatcgctttggatcagctcgagaaggggaaggcggagggtcaa
aggtcggccgtgtggattcgagcgctccttcaggatcagctgagccagctgggatacttc
ctgcagaggcacgcagggaaggtgctttttgtcgcgatactggctctagcgaccttctgc
gttgcgctaaagtcggtccaagttcacagccgggtagaccaactatgggtacaggagggt
ggaaggctggagaaagaggtccaatacgcgagcgaggctctcggcgaggctgcagcctcg
acgcatcagcttgtgatccagaccccgaagcacgcgggagcaaatatcctacattcgagt
gctctgaaggaacatttgaccgccctcagagccgcgactcaagtcaccgtccagttgttc
gatacgtcctggcgcctgaaagacatgtgctacgcgccgagcgtgcccaattacgacatg
cactatgtcgaccagatattcgagaacatcataccgtgcgcgataatcacgcccttggac
tgtttttgggaaggtagcaaactccttggtcccgagtatccagttcacataccgcacagt
aaaaccggggttcaatggacgaatttaaaccccaccgagatgctggaacagatgaaaaaa
cttccgttcgtattctccttcaagactctcgaggactacatgaaacggtcagggataacg
aacgggtaccagagcaaaccgtgtctcgaccccacggacaaggactgtcccgaaactgcc
ccgaacaaaaagtcacaacagccaccagacgtaggagcagagctgaccggaggctgttac
ggatttgcagcgaagtacatgcactggccagaggagctcgtagtcgggggagcaaagcac
aataagactggtcaccttacgcgggccgcagcactgcagaccgtcgttcagctaatggga
gagcgggaactctacgagttttgggtgaacacgtacaaagttcatcacatcgattggtcc
caggagaaggcgtctatcgttctcgatacctggcagcgggcgttcagcaacgaaataaag
aaacaactgaagggaaacggaagcgcgccttacaacctctacgcctttagcacaaccacg
atgaacgacattcttggaaagtacagcgagatatcggtcgtgaaaatcgtcatcgggtgc
gcgctaatggtcctctacgcgggattggctctcctgaggtggaacgaccctgtgcgctca
caatcgggggttggaatcgcgggtgtgatgctggtgtgcgcggcggtcgcagcgggtctg
ggtttctgcgcgctcttgggcatcccattcaacgcggcgacgacgcagatcgtgcctttc
ttggcgctgggtcttggtgttcacgacatgttcctgctgacccatacctacgcggagttg
tcggttaacgaggtgcggagcggagaacagacgggaatggtgctgaaacgtacggggttg
tctgtactcctgacggggctgagcaacgtctcggcatttttcgccgcggcgatgatcccc
gtaccggccctgagggtcttctctctgcaggccgcgatcctgatcctcttcaacctcgcc
gcgatgctgctgattttcccggcgatggtgagcctcgatcttcgccggcgtcgatccggc
cgctccgacattttctgctgttgtcttccggccctgaaaaggcccacggtttactcccca
ggcagtgcaggctgcaggggcaacggttgcggaaccgcgaagcagaccgtgacgcgggcg
attccgcccgagcgccgggagacctgcacgcaaatactgagcccgaggagccacaggaac
gaggcgtggatcggcggcgacgtcaaaggggacgccgagaagcagcccaccgaggacgac
tcgctgaccggctgctcaaaggacgactgcctcggatttggcctctcgcagctcgccgcc
cggcattacgcacctttcgtaacccgtccgacgaccaaggtcttcgggatgatgctcttc
gctggtattctggccggcagcgcttggcaggcgacgagggtcaacgatggactcgagctg
accgacctcgtcccccaaaattcggacgagcacggcttcctcgccgcccaagcgaagcac
ttcggattttacaacatgtacgcggtgaccggacgcgactttgagtacccgaataatcag
cgcctcctctacgagtaccacgatgccttcatgcgtgtcaagaatgtcatcaagaacgac
gacggtggactcccggagttctggctcggccttttcagggactggttaaagggacttcag
gcggcgttcgaccgcgactacagccgaggttgcgtcgttcaggaggagtggttcaagaac
gcgagcgacgacgcaatcctggcgtataagttgatggtgcaaaccggccacgttgacaac
ccgatcgacaagacgctcatcaatcaaacgcgactcgtcgactctgacggtattataaat
cctagggctttttacaactacctcagcgcctgggcgtcgaatgacgcctttgcctacggc
gcttctcaggctaacttgagaccggaacccaggcagtggttctacacaaacgaccccgag
ctcaagataccaaagagcatgcctctcacctacgcccagatgcctttttaccttcacaaa
ctcacggacaccgatcagatcaccgagctcatcggcagtgttcgcgaactctgcagaaaa
ttcgaggaacgtggtcttcctaattttccctccgggattccatttctttattgggaacag
tacatgggcctgagaggatgtctcggtatagcgcttctcgctgccctcggcgcttccgtt
gccgtagttggagttcttcttctcaatctatgggccgctcttctcgtcggcacctcgttg
gctggggttgttttacagctacttgggatcatgggactttgcggtataaaactaagcgcc
gttcccgctgttttactcgtcgtgagcgtcggtatcgccgtacacttcaccgttcacata
tgtctgagtttcgttacgagcatcggcagcagggacagacgagtcagactggccttggaa
cacatgtatgctccagtggtgcacggtgctctcacgacgctattggcggtaatgatgctc
ggactgtctgagtttgacttcatagtgcggtactttttcctggtactggtcagcctcatt
ggtatcgggctcgtgaacggactcttcttcttccccatactcctttccctggttggtcca
tcgccggaagtcatacccaacgatcatcctgacagaatatcgacacccacgcccccagca
tcccccattgtcaggcggaccaagcccccggcgccgcctaaacgaccccacaagagcgag
agcaataggctgcacgccgagccttcgctgaccacaatcaccgaggaaccaaattcatgg
cacagtactcaggaatcgtgcatcattgttcagccagagctcaaagtcgagacgacttcg
acgtgcggcaatcagaactgtggtggatccgacacgagtggttctagtcgaacgtctcca
gtaccttcggcttctcacatcacaactaaggtgacagctacagctaacataaaggtcgaa
gtccacacgccgttgtccagtggagtggaccgtggtgagaaatgcagacacggcggtgtc
gcgagcagcaggcggagttcgcgttgcagcacgaacgttaacgggggggaatcttccggt
tctgaaccagattctgactcaaatgcgaacccgacgaacacgtacaaacactga
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