Neodiprion pinetum (white pine sawfly): 124224934
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Entry
124224934 CDS
T08966
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124224934 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npt03019
]
124224934 (Ndc1)
Messenger RNA biogenesis [BR:
npt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124224934 (Ndc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
DUF5453
Motif
Other DBs
NCBI-GeneID:
124224934
NCBI-ProteinID:
XP_046493170
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Position
1:4807764..4810251
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AA seq
579 aa
AA seq
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MTSELSTSAKCKEHLIWRMFMAIVTSVCVQFIFMTFVILIVNFRIMHPLTWIINTWNAVT
CFRTWSYFLILATVIFLQGVICSKDYLTAPVYRKSRFSIVCNMFKPHNLLVGGLHILVGG
VLVWLHLSLQDERLGLLTVNCDGEETCLVEENFFLLLGGFWIGFYFFVKSNFHTTHLQFP
IVPRSKFSQIKGGIGYLLPHAAMNALSPVLCFIFFYYIDGGYCRETVLSIFSIKMKDVPL
DTLYGLLNISLFFYTWLFTTLFLLTTYTMHLSFEAHLTQRMVFDIEQQSLFADQSSGMCL
ADALATDQVPIIQHLAYYDLVTLAQKEKPRRSILFTLSTPGGRPCNWNSIAVKCMGLLNS
FTLEVNQACATNHKLLSGPTNTSTSGKLSETSYPYKMRNLTAARLLAPNLDSTIPPLPKQ
NSNGDLFITQFLRSKRQEFITYLLSVPMIRYVFEETLEEKIRYIFRNAQPVIWAAEGISS
LIVISLKEDQYGVIQQDLPTIIRTLLSLKEALDKLHKANIFVKKSQSDDKEIRQMMMCLI
STIKRSIYRITTTFKDYIEDLPLEPDIIGQLQSFLSYRE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggaactttcgaccagcgctaaatgcaaggaacatttaatatggagaatgttt
atggccatagtgaccagcgtctgtgtacaatttatatttatgaccttcgtcatactgata
gtaaatttccgaataatgcatccgctgacatggatcataaatacgtggaatgcagtaacg
tgcttccggacttggagttacttccttattttagccacggtgatattcctgcagggtgtg
atatgcagtaaggattacttaacagctcccgtctatcgaaaaagcagattctcgatcgtc
tgtaacatgttcaaaccacacaatttgcttgttggaggattgcacatattagtcggtggc
gtgctagtctggcttcatttatccctgcaggatgaacgccttggtttgctgaccgttaat
tgcgacggagaagaaacatgcctcgttgaagaaaactttttcctactgctcggcggcttt
tggatcggcttttacttctttgtcaaatcaaattttcatacgacacatctacagttcccc
attgtgccccgatcgaagttctctcaaatcaaaggtggaattggataccttctaccacac
gctgcaatgaacgccttgtcacctgttctatgcttcatattcttttactatatcgatgga
ggatactgcagagaaactgtgctttctattttctctataaaaatgaaggatgtaccgctg
gacacactttacggactgctaaacatatctctgttcttttatacctggctattcaccact
ctcttcctcctaacaacatacacgatgcatttgtcattcgaagctcatctgacacaaagg
atggtttttgacattgaacagcaaagcttatttgccgatcaatcctctggtatgtgtctt
gcggacgcattggccaccgaccaagtacctatcatacaacatttggcctactacgacttg
gttacgctggcgcagaaagagaagccacgcagatcgatattattcactctcagtactcca
ggcggtcgtccatgcaactggaatagtatagctgtaaaatgcatggggctgttgaacagt
tttactctagaagtcaaccaagcatgtgctacaaatcacaagttgttatctgggccaact
aatacatcaacatctggaaagttgtccgaaacgtcttacccttacaaaatgagaaatttg
actgctgctagactccttgcgccaaatttggactctacgatccctcctctgcctaaacaa
aactctaacggagatctgttcatcactcagtttcttaggagtaaacgacaggaattcata
acatacctattatcagtgcccatgatcagatacgtatttgaagagactttggaagaaaag
atacgttatatattcaggaatgctcaaccggttatatgggctgcggaaggtatttcttcg
ttgattgtgatttcccttaaagaggatcagtatggggtaatacaacaagacttgccaacg
atcatcagaactttattatcactaaaggaagctttggataaattacacaaggctaatata
tttgtgaaaaaatcacagagtgacgacaaagagataaggcaaatgatgatgtgcttaata
agtacgattaagcgcagtatttatagaattaccaccacatttaaagactatattgaggac
ttgccgctagaaccagatattataggacagctgcagagctttctatcttatagagagtaa
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