Nostoc punctiforme: Npun_BF004
Help
Entry
Npun_BF004 CDS
T00713
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
npu
Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npu03021
]
Npun_BF004
Transcription machinery [BR:
npu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Npun_BF004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_Mga
HTH_17
HTH_24
Sigma70_ECF
HTH_23
MarR_2
HTH_11
HTH_3
HTH_29
MerR
LexA_DNA_bind
HTH_8
HTH_7
HTH_31
HTH_DeoR
HTH_38
FaeA
Motif
Other DBs
NCBI-ProteinID:
ACC85154
CyanoBase:
Npun_BF004
UniProt:
B2JB50
LinkDB
All DBs
Position
pNPUN02:3100..4050
Genome browser
AA seq
316 aa
AA seq
DB search
MLSPTTDSVRSYLKEIGRYPLLTPDQEITNARLVQQMMAVEEQRSNLALQLNRQPTDLEL
ATSLGQNEAELQSVIQQGQKAKQKMVTANLRLVVSVAKKYQNYSLDFLDLLQEGALGLQR
GIEKFDPNKGYKLSTYVYWWITQSITRAVADKSRTIRLPIHINEKLNKIRRVQQQLSQSL
GRPPVVAEIAESLNLSPNQIREYLQISKPLVSLEKRVGDEGESELADILPMDGISLDEQI
TLESLQQDLAKLLALLKPRQREVLTLRFGLSDNQQLTLSQVAKRLNLSRETIRKTEHLAL
SILRSHQNKIKDYLLN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtccaactaccgactcagttcgctcctaccttaaagaaatcggtcgctatcct
ctgctgactcctgaccaagaaattacaaacgctcgactcgtgcagcagatgatggcggtt
gaagaacagcgctcaaacctcgcacttcaactcaaccgccaaccaactgacttggaatta
gctacgtcgcttgggcaaaacgaagctgaactacaatcagtcatccaacaaggccaaaag
gctaaacagaaaatggtgacagctaacctgcgtctagtggtttctgttgccaaaaaatac
cagaactacagtttagattttcttgacttgctgcaagaaggggcgctggggctgcaacga
gggattgaaaagtttgaccctaacaaaggctacaaactatcaacctatgtttattggtgg
atcacgcaatcgataacacgggctgtagcagataagtctcgcactatccgtctgccaatc
catataaacgaaaaattaaacaaaatcaggagagtacagcagcaactatctcaatctttg
ggtcgccctccagttgtggcagaaattgccgaatcgttgaatctatcgcccaatcaaata
cgggaatatcttcagatttctaagcctctagtctccttagaaaagcgagtgggagatgag
ggtgaaagtgaactagccgatattttgccgatggatggcatttctctagatgagcaaata
actcttgagtctctacagcaggacttagccaagttgctggcattgcttaagccaaggcaa
cgagaagtattgactttacgttttggattgtcagataatcagcagttgactttgagtcaa
gttgcaaaacgcctaaacctaagtcgagaaacaattcgtaaaactgaacatcttgctctc
tctattttgcgctctcatcaaaataaaattaaagactatcttcttaattaa
DBGET
integrated database retrieval system
