Nostoc punctiforme: Npun_F0932
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Entry
Npun_F0932 CDS
T00713
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
npu
Nostoc punctiforme
Pathway
npu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Npun_F0932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npu03019
]
Npun_F0932
03400 DNA repair and recombination proteins [BR:
npu03400
]
Npun_F0932
Enzymes [BR:
npu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Npun_F0932
Messenger RNA biogenesis [BR:
npu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Npun_F0932
DNA repair and recombination proteins [BR:
npu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Npun_F0932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACC79664
UniProt:
B2IU93
LinkDB
All DBs
Position
1104313..1105758
Genome browser
AA seq
481 aa
AA seq
DB search
MNQPTIKSWQEVRAAFKTIWGYEDFRPPQGEIVNSLLSQKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELRESHQKAALLHSELSSSQRRATLQALERQQLRLLYL
SPETLLSAPVWERLCHPQLQINGLILDEAHCLVQWGDTFRPAYRRLGAVRPALLKSKPPG
TKISIAAFTATADPSAQKIIQTVLQLQQPEIFRLNPYRPNLHPSIRIAWTPRGRKQQLLK
FIQNRPQQSGLVYVRTRRDSEDLAQWLAEMGYATASYHAGLGATERREVEASWLSGKIPF
VVCTCAFGMGINKSDVRWVAHFHAPHLLSEYVQEIGRAGRDGKPAEALTLVSEPTGWLDS
GDKQRQEFFQEQMRSQQQIAQQLVKKLPKQGEVNAVTRQFPEGATALALLHSSGQLNWLD
PFHYTIAQKVGNQPPNQLHAAKQMQQYLTTKQCRWQFLLNAFGFDKEAANLRCGHCDNCC
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcctacaataaaatcttggcaagaagtccgtgctgcttttaaaacaatctgg
ggttatgaagatttccgtccaccacagggagaaattgtcaatagtttattgtcacaaaaa
gatgcgctgattattatgcccacaggtggcgggaagtcaatttgttttcaacttcccgca
ctgctacaaacaggattaaccttggtagtttcgcccttggtggcgttgatggaaaatcaa
gttcaggaactacgagaaagccaccaaaaagcagcactcttgcatagtgaattatcttca
tctcaacgccgtgcaactctgcaagctttggaacgtcaacagctaagattactttattta
tcgccagaaactttgctcagtgcgccagtttgggaaagattatgtcacccgcaattgcaa
attaatggtttgattttagatgaagctcattgtttggtgcagtggggtgatacttttcgc
ccagcttatcgcagattaggggcggtgcgtccggcgttgctcaaatcaaaaccaccagga
acaaaaattagtatcgccgcttttaccgctactgctgatccctcagcccaaaaaattatt
caaacagttttacaattacagcaaccagagattttccgcttgaatccttaccgtccgaac
ttgcatcccagcattcgcattgcttggacaccacggggtaggaaacaacaattattaaag
tttattcaaaatagaccgcaacaatcgggattagtttatgttcgcactcggagagatagc
gaagatttagcccaatggttagcagagatgggttacgctacagctagctatcatgcggga
ttgggtgcaacagaacgccgtgaagtagaagcaagctggttaagtggcaaaatccccttt
gttgtttgtacctgtgcgtttggtatggggataaataaaagtgatgttcgctgggtagca
cattttcacgcaccacatctgctatctgaatatgtgcaagaaatcggccgcgctggaagg
gatgggaaaccagcagaagcgttgacattggtaagtgaacctacggggtggttagattca
ggggataagcaaagacaggagttttttcaagaacaaatgcgatcgcaacagcaaatagcg
cagcaacttgtgaaaaaattaccaaaacagggagaagtgaatgcagtaactcgacaattt
cccgaaggtgctacggcactagctttactccatagcagtggtcagctaaactggcttgac
ccttttcattacaccattgctcaaaaagtgggaaatcagccaccaaaccaattacacgcc
gctaaacagatgcagcaatacctaacaactaagcagtgtcgttggcagtttttgttaaat
gcctttggttttgacaaagaagcagctaacctgcgttgcggacattgcgataattgctgt
caatga
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integrated database retrieval system
