Nostoc punctiforme: Npun_F0996
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Entry
Npun_F0996 CDS
T00713
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
npu
Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npu03021
]
Npun_F0996
Transcription machinery [BR:
npu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Npun_F0996
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
ACC79727
UniProt:
B2IV51
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Position
1178470..1179720
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AA seq
416 aa
AA seq
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MPATSFYADAPYNTKKSRQALDSDLTVDESELSVDDLQELEIASVDNANFAASTNRRSTD
LVRLYLQEIGRVRLLGRDEEVSEAQKVQRYLRMRIVLANAAKLGDEVIIPYLRLVEVQER
LTSELGHRPSLERWAATADIVLSDLRPTLANGKRRWAEIAKLTVEELEQVQSQGLQAKEH
MIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQG
ITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLATELEMTPTQVREVL
LRVPRSVSLETKVGKDKDTELGELLETDCVTPEEMLMRESLQRDLHHLLSDLTSRERDVI
LMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLIRDYLESLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacatctttttatgcagatgccccctacaacaccaaaaagtcccgccaggct
ttggactcggatctcacggttgatgaaagcgagttatcggtagatgatttgcaggagcta
gagatcgcttctgttgacaatgctaactttgctgctagcactaaccgccggagtacagac
ctggtacgcctatacctccaagaaattggtcgggttcgcttgttggggcgcgatgaagag
gtttcagaagctcaaaaagtccagcgttacttgcggatgcggatagtacttgctaacgcc
gcaaagcttggagatgaagtgattataccctatctaaggttagttgaagttcaagaacgt
ctaacctcggaactaggacatcgcccatctttggaaagatgggctgctactgctgatata
gttttatccgatcttaggccaactttggcaaatggcaaacgtcgctgggcagaaattgct
aagttgacagtagaagagttggagcaagttcagtcccaaggactccaagcaaaagaacac
atgattaaggcgaatcttcgcttagttgtgtctgttgctaagaaatatcaaaatcgtggt
ttggaattgttggatttagtccaagaaggcacactaggtttggagcgggctgtagaaaaa
tttgaccccactaagggttatcgcttcagtacttatgcttactggtggattcgtcaggga
attacacgggcgatcgcaacttctagtcgcactatccgcctccctgtccatattaccgaa
aagttaaataaaatcaaaaaggctcaacgcaaaattgctcaagaaaaaggtcgcacccca
actctagaagatttagcaactgagttagagatgacaccgacccaagttcgagaagttttg
ttacgggttcctcgctctgtttctttggaaaccaaagtaggcaaagataaagacactgag
ttaggcgaattactagaaactgactgtgtgaccccagaagaaatgttaatgcgagaatct
ttacaaagagacttgcatcatcttctctcagatttaactagccgggaacgcgatgtaatt
ttgatgcggtttggtttggcagatggtcatccttattccttagcagaaattggccgcgct
ctcgacttatcccgcgaacgagttcggcaaatagaatccaaggctttgcaaaagctacgc
caacctaagcgtcgcaacctgatccgcgattatttggaatctcttagttaa
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