Nostoc punctiforme: Npun_F1577
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Entry
Npun_F1577 CDS
T00713
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
npu
Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npu03400
]
Npun_F1577
DNA repair and recombination proteins [BR:
npu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Npun_F1577
Archaeal homologous recombinant proteins
Npun_F1577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
DUF5408
Motif
Other DBs
NCBI-ProteinID:
ACC80262
UniProt:
B2J0P5
LinkDB
All DBs
Position
1944344..1947370
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACISGSNGAGKSSLLEAITWAIWGESRATAEDDV
IYSGAKEVRVDFTFQSNQQKYRVIRTRIRGGTSVLEFQIEIPSGFRSLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILAELLKLNQYDDLEERAKESSRQF
KARAVELERSLESIKIQLQQRETTEAQRVELEAELNQLQQVQAFDNIQLQSLQVVQHQRQ
NWEQQLSFVKQQYQNLTQDCDRLQQEQSAIGSQLSDLEKILHQEAEIKAGYTQYQSLQSQ
EEAFAAKFEEYTRAQQTRQQKQQHLTKQIHEIERQLQQAQAQLEALHQQERDIQQTLTKS
GEVEAALSQLAAARHHVARLDQLQMQVTPLLQQRATLQSQLDRTHAGLVARLEQLQSTEN
QLQRQQHRQPQLQQAVMDVAIQIEELEKKRVYLQRVQEKGHERRHFIERLQAHQRDYEKL
LGELEQKLQMLQNPEALCPLCERPLDEHHWSRVVEKTQAELEDTQGQFWVVREQMAVSDR
EIQVLRQEYREISQQLASYDGLREQRGQLAAQLEATTDVQQQLQQIAAEKQHLERSLQAG
DYAPDKQAELRQLDQYLQQANYNEQDHALARSEVERWRWAEIKQGQIKDATKRQAQLLAR
KPELQSQIAQLQVRIQQDQTDSECAKQIAALERHITEIGYSSEQHNNLRIAVRQAQSWHL
RYQQLLSAQQQYPQLQTRLQELEESRSARVTERQKLGGQIESIIQQLQATANPSAQIQAL
EQQLAIRRRQLDEQIAKLGRLEQLALQLETLQIQYEQQHQQLQSCKQEYRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSGNQFHVQFITQKAGRSAKSTKKNAKLIDTLDI
LIADSRGTRSYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIVDEGFGTQDAEGCD
RLIAAINAIASDFACILTVTHMPHLKEAFQARIEVNKTQEGSQLSLSI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtacaacttatcctcaaaaactttcttagttaccgtgatgcaactttagat
tttcgtggtttgcatacggcttgtatttcgggttccaatggtgcgggtaaatcctcgctt
ctggaagcaatcacttgggcaatttggggtgaaagccgtgccactgctgaagatgatgtc
atctattctggcgcgaaagaagttcgggttgattttacttttcaaagtaaccagcaaaaa
tatcgggtgattcgtacccgaattcggggaggtactagcgttcttgaatttcaaatagaa
atcccatctgggtttcgctcacttactggcaaaggggtaagagcaacccaagatttgatt
ttagaacacatcaagctcgattacgatacttttattaactctgcctacttacgtcaaggc
cgtgcagatgagttcatgctcaagcgccccacggaacgcaaagaaattttagcagagtta
ttgaaactcaatcagtatgatgatttggaagaacgagcaaaggaatcttctcgtcagttc
aaagcgcgagcagtagagttagagcgttctttagagtcgattaaaattcagttgcaacaa
cgcgagacaaccgaagcgcaaagagtcgagttagaagccgaactcaatcaactgcaacaa
gtacaagcttttgataatattcaattacaaagtttgcaagttgtccagcaccagcgccaa
aattgggaacaacaactcagctttgtgaagcagcaataccaaaatcttacccaagattgc
gatcgcctccaacaagaacaatcagctattggctctcagctatcagatttagaaaaaata
ctacaccaagaagctgaaattaaagctggatacacccaatatcaaagtctacaatctcaa
gaagaagcctttgctgccaaatttgaagaatacacccgcgcccaacagactcgccaacaa
aagcaacaacaccttaccaaacaaattcacgaaatcgaacggcaactgcaacaagcccaa
gcgcagttagaagctttgcaccaacaagagcgagatattcagcaaactctaactaaatca
ggtgaagtagaagctgctttgtcacaattagccgcagcccgtcaccatgttgctcgtctg
gatcaactgcaaatgcaagtgactccgttgttgcaacaacgagcaactttacaaagccaa
ctcgatcgcactcatgctggtttagtagcgcgactcgaacaactccaaagtactgagaac
caattgcaacgccagcagcaccgccaaccgcaattgcaacaagccgtgatggatgtagca
atccagattgaggaactggagaaaaagcgggtttatctgcaacgagtgcaggaaaaaggg
catgaaaggcgacactttatcgaacgtctgcaagctcatcaacgtgactatgaaaagcta
ctgggagaattagagcagaaattacaaatgctccaaaatcctgaagctctttgtccattg
tgcgaacgtcctttagacgaacatcactggagccgagtggtggaaaaaacccaggctgag
ttagaggatacccaagggcagttttgggtagtgcgggaacaaatggctgtatcagacaga
gaaatacaggtgcttaggcaggaatatcgggaaatttcccaacaattagcgagttacgat
ggtttacgcgaacagcgaggacagttggccgcacagttagaagcgacaactgatgtgcaa
caacagttacaacaaattgctgctgaaaaacaacatttagagcgatcgctccaagctggt
gattacgctcccgataaacaagccgaactccggcagttagaccaatatctgcaacaagct
aattataatgaacaagaccacgccctcgcccggagtgaagttgagcggtggcgatgggca
gaaattaaacaagggcagattaaagatgctactaagcgacaagcgcaactattagcccga
aaaccagaattacaatcccaaattgctcaattacaagtcagaatccagcaggatcagact
gattctgaatgtgctaaacaaattgcggctcttgaacgtcacattaccgaaattggctac
agttccgagcagcacaacaatctgcgtatagctgtccgccaagctcaatcctggcatttg
cggtatcaacaactgctatcagcccagcagcagtatccccaactccagacgagattgcaa
gagttagaggaatccagaagcgccagagtaacggagcggcaaaaacttggcggccaaatt
gaaagcattatccagcaattacaagcaacagctaacccatctgcccaaattcaagcttta
gagcagcagttagcaatccgcagacggcaactcgatgagcaaattgccaaattagggcgt
ttggaacagctggcgcttcaactggaaacgctgcaaattcagtacgaacaacagcaccag
caattacaatcttgtaagcaggagtatcgtgtttatcaggaattagcgcaagcttttggt
aaaaatggtatccaagcactgatgattgagaatgtgttaccgcaactggaagccgaaaca
aatcaactactttcgcggttgagtgggaatcagtttcatgtacaatttattactcaaaaa
gctggacgtagtgctaaatcaaccaagaaaaatgccaagctgatagacaccctagatatt
ttaatcgccgattctagaggaacgcgatcttatgaaacttactctggtggagaagccttt
agaattaactttgccatccgtttagccctggcgaaattattagcgcaacgggcaggggcg
gcgttgcaattgttgattgtggatgaaggttttggtacacaggatgccgaaggatgcgat
cgcttgattgcagcgattaatgcgatcgcctccgattttgcctgcatcctcactgtcacc
cacatgccacacctcaaagaagctttccaagcccggattgaggtgaataaaactcaagaa
ggttcgcagttgagtttatcaatttaa
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