Nostoc punctiforme: Npun_F4406
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Entry
Npun_F4406 CDS
T00713
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
npu
Nostoc punctiforme
Pathway
npu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Npun_F4406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npu03400
]
Npun_F4406
Enzymes [BR:
npu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Npun_F4406
DNA repair and recombination proteins [BR:
npu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Npun_F4406
RecFOR pathway proteins
Npun_F4406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
nSTAND3
AAA_16
AAA_14
Rad17
TsaE
AAA_22
Sigma54_activ_2
TIP49
AAA_33
RNA_helicase
AAA_25
AAA_18
AAA_17
AAA_24
bpMoxR
Resolvase
AAA_28
AAA_PrkA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACC82777
UniProt:
B2ITR9
LinkDB
All DBs
Position
5483444..5484544
Genome browser
AA seq
366 aa
AA seq
DB search
MAIISSKKQPPEPNGEPKQRRESAKAPSTENILKPEAAIDEQEQQEEGIRPHRFADYIGQ
KDLKDVLDIAIKAAKSRGEVLDHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALERP
RDIVGLLVNMKPGDILFVDEIHRLSRMTEEILYPAMEDYRLDITIGKGSSARIRSLPLSK
FTLVGATTRVGALTSPLRDRFGLIQKLRFYEVDELTQIVLRTAQLLKTPVTQDGATEIAR
RSRGTPRIANRLLKRVRDYAEVKVSGVINESIASEALQLFQVDPCGLDWTDRQMLSVIIE
QFNGGPVGLETMAAATGEDTQTIEEVYEPYLMQIGYLTRTHRGRMATKAAYKHLGFTPPN
EQLSLL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgataatctcctcgaaaaaacagcctccagaacccaacggagaaccaaagcagcgt
cgggagtcggcgaaagcaccatccacagaaaatattttgaagcctgaagctgctattgat
gaacaagaacaacaagaagaaggtattcgaccgcaccgatttgccgattacattggacaa
aaagatttaaaggatgtgctagatattgccattaaagcagccaaatctcgtggtgaggtg
ctggatcacttactgctgtatgggccgccgggattgggcaaaaccacaatggcaatgatt
ttagcatcggaaatgggggtaaattacaaaattacgagtgcgccagccctagaacgtcca
cgagatattgttgggctactggtgaacatgaagccaggggatattttatttgtggatgaa
attcatcgcctctcgcggatgacggaagaaattctctatccggcaatggaagattatcgc
ttagatattactattggtaagggttccagcgctcgcattagaagtttgccactgtcaaag
tttaccttagtgggtgctacaacccgtgtcggtgctttaacttcaccactgcgcgatcgc
tttggtttaattcaaaaacttcgattttacgaagttgacgaactgactcaaattgtactg
cgaaccgctcaattactcaaaacccctgttacacaagatggtgctacagaaattgcccgt
cgttcacgcggaacgccacgtattgccaataggctactaaagcgtgtacgtgattatgcg
gaagtaaaagtatctggggtgattaatgaaagcattgcatctgaagcattgcaactattc
caagtagatccttgcggtttagattggacagaccgccagatgctgagtgtgataattgaa
caatttaacggcggtccagtggggttagaaacaatggcagcagcgacgggtgaagatact
caaacaattgaagaggtgtacgaaccttacctcatgcagattgggtatttaactcgaact
catcgcggcaggatggcgactaaggcagcatataagcatttgggattcacgccgcctaat
gaacagttgtcattattgtaa
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