Nostoc punctiforme: Npun_R0306
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Entry
Npun_R0306 CDS
T00713
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
npu
Nostoc punctiforme
Pathway
npu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Npun_R0306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npu03400
]
Npun_R0306
Enzymes [BR:
npu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Npun_R0306
DNA repair and recombination proteins [BR:
npu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Npun_R0306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ACC79091
UniProt:
B2J5S5
LinkDB
All DBs
Position
complement(388940..391468)
Genome browser
AA seq
842 aa
AA seq
DB search
MYINGISLSPLVVAQASESYQSGTTLNRWVEVLVDCPGSTGLFTYRLPAQLEIKPGDILS
VPFGAQQLGAIAIRLLAQPNVDLAPEKIREVEDIVSVGFFPSAYWELLNRVAAYYYTPLI
QVIRVALPPGLLGRSQRRIRLVRGGRAAGSSYLLASTNPSAFLTPTARQVWELLQTQPAG
DYSFAYLQQKVKSAYRGIRELLRFGLVESYLEPPRLTRPKLQKAVTLTGTIDCDLTTRQR
EILVVLRRHNGELWQNELLQICNASSSILKTLSQKGYIVIEEREVLRTEQGPVLAGDGAK
SLTSAQASALATIETLDGFAEVLLHGVTGSGKTEVYLQAIAPLISEGKSALVLVPEIGLT
PQLTDRFRARFGNKVSVYHSALSDGERYDTWRQMLTGKPQVVIGTRSAVFAPLPKLGLII
LDEEHDSSFKQDSPIPTYHARTVAQWRAELENCPLLLGSATPSLESWISVRRQKAEGRRQ
ETYYLSLPERINSRPLPPVEIVDMRQELQQGNRSIFSRSLQEALQQLQERKEQGILFIHR
RGHSTFVSCRSCGYVLECPHCDVSLAYHHTEEKAPELLRCHYCNYARSHPKYCPDCSSPY
LKFFGSGTQRVTQELARQFPELRLIRFDSDTTRNKGSHRTLLTQFANGEADLLVGTQMLT
KGLDLPQVTLVGVVAADGLLNLSDYRASERAFQTLTQVAGRAGRGNDPGRVIVQTYTTEH
QVIAAVRSHDYHSFSQAELEQRQALNYPPYGRLILLRLSSLDPIQVQNTAQIIATALSTE
EKFEILGPAPASILRVANRYRWQILIKFAPDALPQLPDWEEVRSLCPASVSLTIDVDPIN
IM
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaatggcataagtttatctcctttagtagtggcccaagctagcgaatcgtac
caatcaggtacaactcttaataggtgggttgaagtactggtagactgtccaggaagtaca
ggattatttacttatcgattaccagcccagttagaaataaaaccaggggatattttgagc
gtgccatttggggcacaacaattaggagcgatcgcaattcggttactggcacaaccaaat
gttgatttagcaccagaaaaaatccgggaagtagaagatatagtcagcgttggatttttc
ccaagtgcttattgggaattactcaatcgagttgctgcatattactatacgcctctaatt
caagtaatccgggttgctctaccaccagggttgctggggcgatcgcagcgtcgtatccgc
cttgttagaggagggcgagcagcaggaagtagttatctattggcatctactaatccttca
gcttttttaactccaaccgcgcggcaagtttgggaacttttgcaaacacaacctgcgggg
gattacagtttcgcctacctccaacaaaaagtcaaatctgcctatcggggaattcgggag
ctgctgcgattcggtttagtagaaagctacttagaaccgccacggctgactcgaccaaag
ctgcaaaaagcagtcacgcttacaggtacaatcgattgcgacttaactactcgccaaaga
gagattttggtagtgctgcgacggcataatggggagttgtggcaaaatgaattactgcaa
atttgcaatgctagttcttctatcctcaagacgttgtcacaaaagggttacatcgttatc
gaagaacgggaagtattgcgaacagaacaggggccagtattggcaggtgatggagctaaa
tctttaacttctgcccaagctagcgccttagcgacaatcgagacactcgatggatttgct
gaagttttattgcatggggtgacaggttcaggaaaaaccgaagtatatttgcaagcgatc
gcacctctcatcagcgaaggtaaatctgccctcgttttagtccccgaaattggacttaca
ccccagttaaccgatcgttttcgcgcccgttttggcaataaagtcagcgtttatcacagc
gccctctccgacggtgaacgttacgacacttggcggcaaatgctcacaggaaaacctcaa
gttgtcattggtacgcgcagcgccgttttcgcgcctttgcccaaattgggtttaattatt
ttagatgaagaacacgacagcagctttaaacaagactcacccatacctacttaccacgct
cgcaccgtcgcccaatggcgagccgaattagaaaattgccccttattgttaggttctgct
accccttccctggagagttggataagcgtcaggaggcagaaggcagaaggcaggaggcaa
gagacatattacttaagtttgcccgaacgcatcaattcccgccctttaccgcctgtggaa
atagtcgatatgcggcaagagttgcagcagggaaatcgttctatatttagtagatcgctg
caagaagctttgcaacagttgcaagagagaaaagaacagggaattttatttatccatcgc
cggggacacagtacttttgtctcatgtcgcagttgtggatatgtgttggaatgtccgcat
tgtgatgtgtcgctggcgtaccaccacaccgaagaaaaagcgccggaattattgcgctgt
cattattgtaactatgcgcgatcgcatcccaaatactgccccgattgtagttccccttat
ctgaaatttttcggtagcggtactcagcgagtaacacaggaattagcgcgacagttccca
gagttacgcttgattcgttttgatagcgataccacccgtaacaaaggctcacaccggact
ttacttacccaatttgccaacggcgaagcagatttattagtaggtacgcaaatgcttacc
aaaggtttggatttaccacaggtgacacttgtgggcgttgtcgccgccgatggattgcta
aatttatcagattatcgcgccagtgagcgggcatttcaaaccttgactcaagtcgctgga
cgtgctggtagaggtaacgatccagggagggtgattgtacaaacttacactacagaacat
caggtaattgcggcagtgcgatcgcacgattatcactctttctcccaagctgagttagaa
caacgccaagccctcaattatcccccttatgggcggttaattttgttgcgcttaagtagt
ctcgatcccattcaagtgcaaaatacagcgcaaatcattgccacagccttgagtacagaa
gaaaaattcgagatattagggccagcaccagcgagtattttacgcgtagctaatcgttat
cgctggcagatattgattaaatttgcccccgatgcattgccacaattgccagattgggaa
gaagtgcgatcgctttgtcctgcttctgttagcttgaccattgatgtagaccccataaat
attatgtga
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