Nostoc punctiforme: Npun_R4366
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Entry
Npun_R4366 CDS
T00713
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
npu
Nostoc punctiforme
Pathway
npu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Npun_R4366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npu03021
]
Npun_R4366
03400 DNA repair and recombination proteins [BR:
npu03400
]
Npun_R4366
Enzymes [BR:
npu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Npun_R4366
Transcription machinery [BR:
npu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Npun_R4366
DNA repair and recombination proteins [BR:
npu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Npun_R4366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
KH_PARP14_8
Motif
Other DBs
NCBI-ProteinID:
ACC82739
UniProt:
B2ITN1
LinkDB
All DBs
Position
complement(5452830..5453777)
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNTEESRNHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEILMRMKEVILKNYSSQPQIGRLLVSGPTTITAAHFDLPSEVEV
IDPTQYVATIAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSIFMPVRKVNYSV
EESRGEGLIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLEPTDTGSDIPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPMERGSKHP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcagattgaatgtgtagagtcgaatactgaagaaagtcggaaccattac
agtaaatttgttctggaacctctagaacgcggtcaaggaacaacggttggcaacgcacta
cggcgggttttactgtctaacctagaaggtacagcagttacagcagtgcggattgcaggc
gtttcacatgaattcgccacagttccgggcgtgcgggaagatgtgctggaaatcctcatg
agaatgaaggaagttatcctgaagaactattcttcgcagcctcagattggtagattactc
gttagtggtccaacaacaattactgcggcacattttgatttacctagtgaagtagaagtt
atcgatccgactcagtatgttgccaccatcgctgagggtggaaaactggaaatggaattt
cggatcgagaaaggcaaaggctatcgcactgtagaaagaggacgtgaggaagccacatcg
ttggattttcttcaaatcgactcaatatttatgccagtgcgaaaagtcaactatagtgtt
gaagaatctcgtggagaaggcttgattccaaaagaccgactactgttggaagtttggaca
aatggcagtatttctcctcaagaagcactatcttcggctgctgggatcttggtagattta
ttcaacccgttgaaagatatctccttggaaccaacagacacaggttcagatattccagat
gatccaactgcccagatacccatcgaagagttgcaactttctgtgcgggcatataactgt
ctcaaacgggcacaagttaactctgtggcagatttgttggattatacccaagaagacctc
ttagaaattaagaactttggtcagaagtcagcagaagaagtcgtggaagctttgcagcga
cgcttgggcattaccctgccaatggaaagaggctctaaacacccttaa
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