Nostoc punctiforme: Npun_R4939
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Entry
Npun_R4939 CDS
T00713
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
npu
Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npu03016
]
Npun_R4939
Enzymes [BR:
npu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Npun_R4939
Transfer RNA biogenesis [BR:
npu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Npun_R4939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
CSD_RNase_II
HTH_RNase_II
KhtT_N
Motif
Other DBs
NCBI-ProteinID:
ACC83284
UniProt:
B2J0D2
LinkDB
All DBs
Position
complement(6118304..6120364)
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AA seq
686 aa
AA seq
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MEKGTLVEFRVQGDRRLGIVERPDGKTRWFVVDERGQSHSLAPRQITYTVTGQTYKPSEI
ASFLEQVNPYLDPSSLEVAWEILVEDGETITPELMANLLFSESAAPHCYAAYCLLSDDKL
YFKQKGDAYEPRTAAQVAERKHQMEVEALKAKGQQEFLIRVEQALKGEAVEWQRHDRQRL
EGLEKYAALLADTVRTGVNYDSLARAYPPSAPVLETMTMLGRPTTPQGAFQLLVDLGCWS
PYENLFLRRSSIPIQFPNKVLEVAQQRLDFPPIDSDTNRLDLTHLKVYTIDDETTTEIDD
GLSWEILPDGRERLWVHIADPTRWLVPEDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLIQGRVCCALSFGIILGTTGGVEDYSIHTSSIKPTYRLTYEDVDEMLQLRVQAEPEIA
AIASWAQKRKTWRYAQGAISITMPEATIKVKGDEINIDILDDSPSRQVVAEMMIVAGEVA
ARYGKAHNIPLPFRGQPQPELPPEEELLLLPAGFVRACAMRRCMPKSEMSITPLRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSADQLKEVMMNVTSITQEVTMVERQT
NRYYALEYLRRHPEETWDVTVLMWLREDSNLALILIEDLGLQLPMVFKRSVNLGEQIVVK
VSHADPQKDMIQFQEIIYQEAQTAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagggcacgctagttgaatttagggttcaaggcgatcgccgtctggggatcgta
gaacgtccagacggtaaaacccgctggtttgtggtagacgaacgtggtcaatcccacagc
ctcgcgcctagacaaataacttatacagttaccggacaaacttacaagccctctgagatc
gcgagctttttagagcaagtcaacccttatttagacccatctagcttagaggtagcttgg
gaaatactggttgaagatggggaaacaatcaccccagagctgatggcgaatctgttattt
tcggaatcagccgcgcctcattgttacgccgcctattgcttgttatcagacgacaaactt
tatttcaagcaaaaaggagacgcttacgagccgcgaactgctgctcaggtggcagaacgt
aagcaccagatggaagtagaggcattaaaagctaaaggacagcaggagtttttaattcgt
gttgagcaggcgctcaaaggcgaagcagtagaatggcagcgccacgatcgccagcgtcta
gaaggactagaaaaatacgcagcgttgcttgctgacacagtgcggacgggagttaattat
gattcattagctcgcgcttatccgccaagcgctccagtattagaaactatgaccatgctg
ggacggcccacaacgccccaaggggcttttcaactattagtagatttgggttgctggagt
ccttatgaaaacttgttcctgcgtcgttcttcaattccgattcaatttcctaataaggtg
ttagaagtggcgcaacagcgtttggatttcccgccgattgactcagatacaaaccgcctt
gatctgactcacctgaaggtttacaccattgatgatgaaactaccacagagatcgacgat
ggtctaagttgggaaattctacccgatggacgggagcgcctgtgggtgcatatcgccgat
cccaccagatggttagtaccggaagatgaattagatttagaagccagaaagcggggcagc
acagtctatttacctacggggatgattcctatgttcccagaggtattggcaactgggcca
atgagtctgatccagggacgggtttgttgcgccctcagcttcggaattattttaggtaca
actgggggagtagaagattacagcattcataccagttccattaagccgacttatcgcctt
acctacgaagatgtagatgaaatgctgcaattacgggtacaggcagaaccagaaattgct
gcgatcgcaagttgggcacagaagcgcaaaacttggcgttacgctcaaggggcaattagc
atcacaatgcccgaagcaacgatcaaagtcaaaggtgacgagatcaacattgatattttg
gacgattccccatcacggcaagtagtcgcagaaatgatgattgttgccggtgaagttgcg
gctcgttatggtaaagctcataacatacctttaccctttcgcggtcagccccaaccggaa
ttacccccagaagaagaattactactacttccagccggattcgttcgcgcttgcgccatg
cgtcgttgtatgcccaagagtgaaatgagcattacgcctctgcgccatgctggtttaggt
ttggatacttacacgcaagcaacctctcccatccgccgctacagtgatttgcttacccac
tttcaactgaaagcccatttgcgcggtgaagttctaccattttccgcagatcaacttaaa
gaagtgatgatgaatgtcaccagcattacccaagaggtgacgatggtagaacggcaaacg
aatagatattatgctctagagtatttacgccgtcatccagaggaaacttgggatgtaact
gtattgatgtggttgcgagaagacagcaacttggccctaattttgatcgaagatttaggt
ttgcagttaccaatggttttcaaacgttctgttaacttgggcgaacagatagtggtgaaa
gttagccatgccgatccgcaaaaagatatgattcagtttcaagaaataatttatcaagaa
gcccaaacagcggcgaattaa
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