Nostoc punctiforme: Npun_R5797
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Entry
Npun_R5797 CDS
T00713
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
npu
Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npu03021
]
Npun_R5797
Transcription machinery [BR:
npu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Npun_R5797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
MerR_1
Motif
Other DBs
NCBI-ProteinID:
ACC84095
UniProt:
B2J979
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All DBs
Position
complement(7162845..7163843)
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AA seq
332 aa
AA seq
DB search
MTLPPNPSLPKSSAMKTAQTATDLVRTYLREIGRVPLLTHEEEIFYGKQVQRSCTLHESR
ESLATQLGRQPTLEEWAKATKLEPVELNEAIADGEIAKRKMVEANLRLVVSVAKKYIKRN
VDLLDLIQEGSIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITE
KLNKIKKAQRQLSQKLGRAPTAGELAQELELTPKQVREYLEKARLPLSLDLRLGDNYDTE
LGEMLEDPGASPEEFVMQSSLSYDLDRLMGDLTPQQREVITLRFGLTDGQALTLAKIGEI
LNISRERVRQIEREALTKLRKSKANMGEYLAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccctaccgccaaacccatcattaccaaagagtagcgccatgaagaccgctcagaca
gccacagacctcgtgcggacttacctgcgtgagattggccgtgtgccactcttaacacac
gaggaagagattttttatggtaaacaggtgcaacgttcttgtacattgcacgaatcaaga
gaatctcttgccacccagttaggtcgtcaaccgaccttagaagagtgggccaaagcgaca
aagttagaaccagtagaattgaacgaagcgatcgctgatggtgaaattgccaagcgtaaa
atggttgaagccaatttgcggctggtagtctccgttgctaaaaagtacatcaagcgcaac
gttgatttactggacttgatccaagaaggtagtattggtatgcaacgtggcgtagaaaaa
tttgaccctaccaaaggttacagattttctacttatgcctattggtggattcggcaagct
atcactcgtgctatagccgaaaaagctcgcactattcggctgcctatccatattactgaa
aaattaaataagattaaaaaggcacagcgccaattgtctcaaaagttgggacgcgctcct
acagctggtgagctagctcaagaattagaattgacccccaaacaagtacgagagtatcta
gaaaaggcgcgtttgcccctttccttggatttgcggttgggtgataactacgacaccgaa
ctaggagaaatgctcgaagatccaggagcatctccagaagagtttgtcatgcaatcttct
ctttcttatgacttagatcgtctcatgggcgatctcacgccgcaacagagagaagtaatt
acactgcgctttggtttaactgatgggcaagcgctgactctggctaaaatcggtgaaata
ctgaacatcagccgagaaagagtccggcaaattgagcgggaagctttaaccaaacttcgc
aagtctaaagccaacatgggtgaatatttggcaagttaa
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