Candidatus Nitricoxidivorans perseverans: OHM77_03860
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Entry
OHM77_03860 CDS
T09820
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npv03009
]
OHM77_03860 (rimO)
Enzymes [BR:
npv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OHM77_03860 (rimO)
Ribosome biogenesis [BR:
npv03009
]
Prokaryotic type
ribosomal protein modification factors
OHM77_03860 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
WIM07021
UniProt:
A0AA49J3D3
LinkDB
All DBs
Position
complement(766276..767589)
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AA seq
437 aa
AA seq
DB search
MVAAPRIGFVSLGCPKASVDAEQILTRLRAEGYELSGSYAGADLVIVNTCGFIDAAVEES
LEAIGEALDENGRVIVTGCLGAKGDIVRTEYPKVLAVTGPHALAEVMAAVHEHLPAPHDP
FVDLVPPQGVKLTPDHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPVGEVMQEAENLVKA
GVRELLVVSQDTSAYGVDVKYRTGFSGGRPVKTRLFDLCRELGDLGAWIRLHYVYPYPSV
DDLLPLMAEGKILPYLDVPFQHASPRILRLMKRPGDIEKTLDRIAAWRAVVPELTLRSTF
ITGFPGETEAEFDELLQFLDAASLDRVGAFAYSPVEDAAANALPGALPEEVREERRMRLM
QHQEDISTRRLEAKIGRTIRVLVDDVDEEGAVARSTADAPEIDGLVYVTDGEDLSVGEFA
DVTVTDCDVHDLYARLI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atagtggcggcgcccagaatcggattcgtctccctcggctgcccgaaggcgtcggtcgac
gccgaacagatactgacccgcctgcgcgccgagggctacgagctctccggcagctatgcc
ggcgccgacctggttatcgtcaatacctgcggcttcatcgacgcggccgtggaagagtcc
ctggaggccatcggcgaggccctggacgagaacggccgggtcatcgtcaccggctgcctc
ggcgcgaagggggacatcgtcaggacggaatacccgaaggtgctcgccgtcaccggcccc
cacgccctggccgaagtcatggcggccgtgcatgagcacctgcccgcgccgcatgatcca
ttcgtcgatctcgttccgccccagggcgtgaagctgacgccggaccactacgcctacctc
aagatttcggagggctgcaaccaccggtgcagcttctgcatcatcccgtcgctgcgcggc
gacctggtcagccggcccgtcggcgaggtgatgcaggaggcggaaaacctggtcaaggcc
ggcgtcagggagctgctggtcgtctcccaggacaccagcgcctatggcgtcgacgtgaaa
tatcgcaccggcttttcgggcggcaggccggtgaagacgcggctattcgacctgtgccgg
gaattgggcgatctgggcgcctggatccgcctgcattacgtctatccctatccgagcgtg
gacgacctgctgccgctgatggcggaggggaaaatcctgccctacctggatgtgcccttt
cagcacgcgtctccccgcatcctccggctgatgaagcggccgggcgacatcgagaagacg
ctggaccgcatcgccgcctggcgcgccgtggtgccggaactgactctccgctccacattc
atcaccggctttccgggcgagacggaagccgagttcgacgagctgctgcaattcctcgac
gcggcgtcgctggatcgcgtcggcgccttcgcctattcgccggtcgaggacgcggcggcc
aacgcgctgccgggcgcgctgccggaagaggtgcgcgaggaacggcgcatgcgcctcatg
cagcaccaggaagacatcagcacgcgccgcctggaggcgaagatcgggcgcacgatccgg
gtgctggtcgacgacgtggacgaggagggcgccgtcgcccgctcgaccgccgatgcgccg
gagatcgacggcctcgtctacgtgaccgacggggaggatctgtcggtcggcgagttcgcc
gacgtcacggtgaccgactgcgacgtgcacgacctgtacgccaggctgatatga
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