Candidatus Nitricoxidivorans perseverans: OHM77_05400
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Entry
OHM77_05400 CDS
T09820
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv00521
Streptomycin biosynthesis
npv00523
Polyketide sugar unit biosynthesis
npv00525
Acarbose and validamycin biosynthesis
npv00541
Biosynthesis of various nucleotide sugars
npv01100
Metabolic pathways
npv01110
Biosynthesis of secondary metabolites
npv01250
Biosynthesis of nucleotide sugars
Module
npv_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OHM77_05400 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OHM77_05400 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OHM77_05400 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OHM77_05400 (rfbB)
00525 Acarbose and validamycin biosynthesis
OHM77_05400 (rfbB)
Enzymes [BR:
npv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OHM77_05400 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
DUF6301
Motif
Other DBs
NCBI-ProteinID:
WIM06702
UniProt:
A0AA49IXL7
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All DBs
Position
1070226..1071296
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AA seq
356 aa
AA seq
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MNKTIFITGGAGFIGSALVRLLIAESDWRIVNIDSLTYAGNLESLGEAGRDPRHVFSRTD
IRDRAALDALFAEHRPAGVIHLAAESHVDRSIHGPGDFIRTNIEGTYTLLEAARGHWSAL
PADEKAAFRFHHVSTDEVFGSLGTTGRFSETTAYDPRSPYSSSKAASDHLVRAWEHTYGL
PTLVTNCSNNYGPCQFPEKLIPLMIGNALAGKPLPIYGKGDNVRDWLYVDDHARALRLVF
EQGRTGETYCIGGDSEKANIEVIDTLCALLDGLRPRAAGGSYRELKAFVADRPGHDRRYA
IDAGKIRRELGWSPRESFESGIEKTVAWYLANPEWVAHVQSGEYRNWIERNYGERK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacaatcttcatcaccggcggcgccggcttcatcggctcggcgctcgtccgt
ttgctgatcgcggaaagcgactggcgcatcgtcaacatcgacagcctgacctacgcgggc
aacctcgaatcccttggggaagccggccgcgacccgcgccatgtcttctcgcgcaccgat
atccgcgaccgggcggcgctcgacgccctattcgccgaacaccgccccgccggcgtgatc
cacctcgcggcggaatcccatgtcgaccgttcgatccacggccccggcgatttcatccgg
accaacatcgagggcacctacacgctgctggaagccgcacgcggccattggagcgcgctg
ccggcggacgaaaaagcggccttccgcttccaccacgtctccaccgacgaagtgttcggc
agcctcggaaccacgggcaggttctcggagaccacggcctacgacccgcgctcgccctac
tcgtcctccaaggccgcctccgaccacctggtgcgggcctgggaacacacctacggcctg
cccacgctcgtcaccaactgctcgaacaactacgggccgtgccagttccccgagaagctc
attccgctgatgatcgggaatgcgctcgcgggcaaaccgctgccgatctacggcaagggc
gacaacgtgcgcgactggctctacgtggacgaccatgcgcgcgcgctcaggctcgtcttc
gagcagggacggacgggcgagacctattgcatcggcggcgactcggagaaggccaacatc
gaggtcatcgataccctctgcgccctgctcgatgggcttcgcccccgcgccgccggcggc
agctaccgcgagctgaaggccttcgtcgccgaccgccccggccacgaccggcgctacgcg
atcgacgccggcaagatccgccgcgagctgggctggtcgccgcgggaaagcttcgagagc
ggcatcgaaaaaaccgtcgcctggtatctcgccaacccggaatgggtggcgcatgtgcaa
agcggcgaatatcggaactggatcgagaggaactacggagaacgcaagtga
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