Candidatus Nitricoxidivorans perseverans: OHM77_06915
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Entry
OHM77_06915 CDS
T09820
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv00550
Peptidoglycan biosynthesis
npv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OHM77_06915 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npv01002
]
OHM77_06915 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
npv01011
]
OHM77_06915 (dacB)
Enzymes [BR:
npv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OHM77_06915 (dacB)
Peptidases and inhibitors [BR:
npv01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
OHM77_06915 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
npv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
OHM77_06915 (dacB)
BRITE hierarchy
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WIM06991
UniProt:
A0AA49J3B3
LinkDB
All DBs
Position
complement(1349048..1350460)
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AA seq
470 aa
AA seq
DB search
MKHILGLLVFACFAASAGAQEGGRLPPPVAAALRAADIPQDAVAVVVQEAGESAPRLNVN
GRAAMNPASTIKLLTTFAALELLGPAHAWVTQALAAAPVGEDGVLAGDLYLKGSGDPKLT
FEQFWLLLRGLRARGVRDIRGDLVLDRAALRPNGHDPAAFDGKPTRPYNVGPDALLLNFK
TIRLALAPDAAGKSVRVLPEPMPANVDLVNALRLRNNGCGDWQESLRADLSERGGRYRLS
LTGAYSAACGEKTWNVAALPHDRYVLGVFAQLWRELGGRFEGGVRDGETPAAARVLTFVE
SPALAEIVRDINKFSNNVMARQLYLALGRDAGGRPEDAEAVLRRWLAARKLDFPELVLEN
GAGLSRQERISAANLVRLLAEAWQSPVMPELMSSLPVVAIDGTMKKRLKENGVAGRAHVK
TGYLEGARAIAGYVLDARGRRQIVVCFINHPNARAAQPALDALLAWVYDG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacatcctcggactgctggttttcgcctgcttcgccgcttccgccggcgcccag
gagggcgggcggctgccgccccccgtcgctgccgcgctcagggcggcggacattccgcag
gacgccgtcgccgtcgtcgtgcaggaggcgggggaaagcgcgccccgcttgaacgtcaat
ggccgggcggccatgaatccggcttccacgatcaagctgctgacgaccttcgccgccctg
gagcttctggggccggcgcatgcgtgggtcacgcaggcgctcgcggcggcgcccgtcggg
gaagacggcgtgctggccggcgacctgtatctcaagggcagcggcgatccgaagctgacc
ttcgagcaattctggctgctgctgcgcggactgcgcgcgcgcggcgtccgcgacatccgc
ggcgacctggtgctcgaccgcgcggcactgcggccgaacggccacgatcccgccgcgttc
gatggcaagccgacgcggccgtacaacgtcggcccagacgcattgctgctgaacttcaag
acgatccgcctcgccctggccccggatgccgcgggcaagtctgtccgcgtcctgcccgaa
ccgatgccggccaacgtggacctggtcaacgccctccggctccgcaacaacggctgcggc
gactggcaggagagcctgcgcgccgatctgtcggagcggggcggccgctatcgcctgtcg
ctgacgggcgcctattccgccgcctgcggcgagaaaacctggaacgtcgccgcgctgccg
cacgaccgctacgtgctcggcgtattcgcgcagctctggcgagaactgggggggcgcttc
gagggcggggtgcgggacggcgaaacgcccgccgccgcgcgcgtgctgactttcgtcgag
tcgcccgcgctggccgagatcgtgcgcgacatcaacaagttttcaaacaacgtgatggcc
cggcagctctatctcgcgctggggcgcgatgcgggcggccggccggaggatgccgaggcc
gtgctgcgccgctggctcgccgcccggaagctggacttcccggagctggtgctggaaaac
ggcgccggcctgtcaaggcaggaacgcatcagcgccgccaacctcgtccgtctgctggcg
gaagcatggcaaagcccggtaatgccggaactgatgtcttccctgcccgtggtcgccatc
gacggcacgatgaagaagcgcctgaaggagaacggcgtcgccggccgcgcccatgtcaag
acgggctacctggaaggcgcgcgcgccatcgccggctatgtgctcgatgcccggggtcgg
cgccagatcgtcgtctgtttcatcaatcatccaaacgccagggccgcccagcccgcgctg
gatgcgctgcttgcctgggtatacgatggctga
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