Candidatus Nitricoxidivorans perseverans: OHM77_07495
Help
Entry
OHM77_07495 CDS
T09820
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv03030
DNA replication
npv03430
Mismatch repair
npv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OHM77_07495 (dnaE)
03430 Mismatch repair
OHM77_07495 (dnaE)
03440 Homologous recombination
OHM77_07495 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npv03032
]
OHM77_07495 (dnaE)
03400 DNA repair and recombination proteins [BR:
npv03400
]
OHM77_07495 (dnaE)
Enzymes [BR:
npv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OHM77_07495 (dnaE)
DNA replication proteins [BR:
npv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OHM77_07495 (dnaE)
DNA repair and recombination proteins [BR:
npv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OHM77_07495 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
WIM04554
UniProt:
A0AA49FI73
LinkDB
All DBs
Position
complement(1456652..1460101)
Genome browser
AA seq
1149 aa
AA seq
DB search
MSSPRFIHLRLHSEYSITDGIVRLDDAIARAAGDAMPALALTDLANLFGMVKFYTAARGA
GVKPIVGCDAWIADGEAGAGGAGDPAARDGTSRLLLLAKNHAGYLRLCELLTSAYLSPRH
HGRAEISRVAIEKGDNTGLIALSGADLGDIGQLLLAGKPEMALDRVRQWARLFPGGYYLE
VQRYGQPRQEQLLGQTVALAGRAGLPVVATHPVQFIDAADFKAHEARVCIAEGYALSDTR
RPKAFTAEQYFKTQAEMAALFADLPEALENSVEIARRCNLTVELGKSRLPVFPTPEGVTF
DDFLAIESRAGLETRLARLFPDAAGRESQRPQYAERLEFEIDTIQQMGFSGYFLIVADFI
NWAKNNGVPVGPGRGSGAGSLVAYALGITDLDPIRYGLLFERFLNPERVSMPDFDIDFCQ
EGRDRVIDYVRKKYGAHAVSQIATFGTMAAKAVIRDVGRVLDLPFNFVDQFAKLIPNELG
ITLARAREQEPQLGERIEREEELRQLWELAEKLEGLTRNVGMHAGGVLIAPGRLTDFCPL
YSADGGVTVSQFDKDDVEKAGLVKFDFLGLRTLTILAEAVRFAREVEGADVDLDALPLDD
RETYDRVFKNANTTAVFQFESRGMKDTLVQAKPDRLEDLIALNALYRPGPMEFIPNFIKR
KHGKERVTYPHPSLEPVLANTYGIMVYQEQVMQTAQVVARYSLGGADLLRRAMGKKKKEE
MDQQREVFVAGAGGNGIGEAQANEIFDTMEKFAGYGFNKSHAAAYSLVAYQTAWLKCHHP
AAFLAATLSSEMADTDKVQFFFNDAVSQGLTFLPPDINTGGVRFAPVDGRTVRYGLGAIK
GTGESALSAILKARESDGPFVDLFDFCRRLDKRVVNRRVIEALIRAGAFDAIDPHRAKLL
ASVGVALEAAEQAERNARQCGLFDMEGPAGAPAARYVEVPHWGERERLLNEKQALGFFLS
GHPFSEYAPEIAAFVRRGLAQLEPGRDAVLMAGIVVGTRTQMTRRGKMAVVTLDDASAQV
EVSVFNELWDAERTKLKEDELLLVEGKVQHDDYTGGLRVTADRLLTLAEARGRFAKLLRL
SMNGSADARKLQAMLAPYRNGPCPVRVSYRNGEAEAEVALPDNWRVRLDDALLAGLRDWL
PGDGVQVVY
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgccccgcttcatccacctccgcctccacagcgaatactcgatcaccgacggc
atcgtccgcctcgatgacgccattgcgcgggccgccggcgacgccatgccggccctggcg
ctcaccgacctggcgaacctgttcggcatggtcaagttctacacggcggcgcgcggcgcg
ggcgtcaagcccatcgtcggctgcgatgcctggattgccgacggcgaggcgggcgctggg
ggtgcgggcgacccggcggcccgcgacggcacgtcgcgcctgctgctgctggcgaaaaac
catgccggctacctgcgcctgtgcgaactgctgacgtccgcctatctgtcgccgcgccat
cacggccgcgccgaaatatcccgcgtcgccatcgaaaagggggacaacaccggcctgatc
gccctgtcgggcgccgacctgggcgacatcggccagctgctgctggcaggcaagccggag
atggcgctggatcgggtgcggcagtgggcgcgcctgttccccggcggctactacctcgag
gtccaacggtacggccagccgcggcaggagcagctgctgggccagaccgtcgccctggcg
ggccgggccgggctgcccgtggtggcgacccatcccgtgcagttcatcgacgccgccgac
ttcaaggcccacgaggcgcgcgtctgcatcgccgaaggctatgcgctgtccgatacgcgg
cggccgaaggcgtttaccgcggagcagtatttcaagacccaggccgagatggcggcgctc
ttcgccgacctgcccgaggcgctggaaaactcggtcgagatcgcgcgccgctgcaacctc
acggtcgagctcggcaagagccggctgccggtgttcccgacgcccgaaggcgtcacgttc
gatgacttcctcgccatcgaatcgcgcgccggcctggaaacgaggctcgcccggcttttc
cccgatgccgccgggcgcgaaagtcagcgcccgcaatacgccgagcggctggaattcgag
atcgataccatccagcagatggggttttccggctacttcctgatcgtcgccgacttcatc
aactgggccaagaacaacggcgtgcccgtcgggccggggcgcggctccggcgccggctcg
ctggtggcctacgccctgggcatcaccgacctcgacccgatccgctacggactgctgttc
gagcgcttcctcaatccggagcgggtgtccatgcccgacttcgacatcgacttctgccag
gagggacgcgaccgcgtcatcgactacgtccgcaagaaatacggcgcccacgcggtgtcg
cagatcgccacgttcggcaccatggcggccaaggcggtcatccgcgacgtcggccgcgta
ctcgacctgcccttcaacttcgtcgaccagttcgccaagctgatccccaacgagctgggc
atcacgctcgccagggcgcgcgagcaggagccgcagctcggcgagcgcatcgagcgcgag
gaggaattgcgccagctctgggaactggccgagaagctggaaggcctcacgcgcaacgtc
ggcatgcacgccggcggcgtgctgatcgcgccgggccggctcacggatttctgcccgctg
tattccgccgacggcggcgtcaccgtcagccagtttgacaaggacgacgtcgagaaggcc
ggcctcgtcaagttcgacttcctgggcctgcgcacgctgacgattctggccgaggcggtg
aggttcgcccgcgaggtggaaggcgccgatgtggacctggacgccctgccgctcgacgac
cgggaaacctacgaccgggtgttcaagaacgccaacaccacggccgtgttccagttcgaa
tcgcgcggcatgaaggacacgctggtccaggcgaagcccgaccggctggaggacctgatc
gcgctgaacgcgctctatcggccggggccgatggaattcatcccgaacttcatcaagcgc
aagcacggaaaggagcgggtcacctatccgcatccgagtctcgaaccggtgctggccaac
acctacggcatcatggtgtatcaggaacaggtgatgcagaccgcgcaggtggtcgcccgc
tactcgctgggcggcgccgacctgctgcgccgggccatgggcaagaagaagaaggaggag
atggaccagcagcgcgaggtgttcgtcgccggcgccggcgggaacggcatcggcgaagcg
caggccaacgaaatcttcgacaccatggagaagttcgccggctacggcttcaacaagtcg
cacgccgccgcctactcgctggtcgcctaccagacggcctggctcaagtgccaccacccg
gcggccttcctggcggccaccctgtcctcggaaatggccgacaccgacaaggtgcagttc
ttcttcaacgacgccgtatcgcaaggactgactttcctgccgcccgacatcaacaccggc
ggcgtccgattcgcgccggtggacggccggaccgtccgctacggcctcggcgccatcaag
ggcacgggcgaatccgcgctttccgccatcctcaaggcccgggaatcggacggccccttc
gtcgacctgttcgacttctgccgccggctggacaagcgcgtggtgaaccgccgcgtcatc
gaggccctgatccgggccggcgccttcgatgcgatcgacccgcaccgggcgaagctgctg
gcctccgtcggcgtggccctggaagccgccgagcaggcggagcggaacgcccggcaatgc
ggtctgttcgatatggaggggccggcgggcgcgcccgccgcgcgctacgtcgaggtgccg
cactggggcgagcgcgaacgtctcctgaacgagaagcaggccctgggcttcttcctctcc
ggtcatcccttcagcgaatacgcgccggagatcgccgccttcgtgcggcgcggcctggcg
caactggagccgggccgcgacgccgtgctgatggccggcatcgtggtcgggacgcgcacc
cagatgacccgccgcgggaagatggcggtggtcacgctggacgacgccagtgcccaggtc
gaggtctcggtcttcaatgaattgtgggacgccgagcgcaccaagctcaaggaggacgaa
ttgctcctggtcgagggcaaggtgcagcacgacgactacaccggcggcctgcgcgtcacc
gccgaccggctgttgaccctggccgaggcgcgcggccgcttcgccaagctgctgcggctg
tccatgaacggcagtgccgatgcgcggaagcttcaggccatgctcgccccctaccgcaac
ggaccctgccccgtgcgggtgtcctaccgcaacggcgaggcagaggccgaggtggcgctg
cccgacaactggcgcgtgcgcctcgacgatgcgctgctggccggcctgcgcgactggttg
ccgggggacggcgtgcaggtcgtctactga
DBGET
integrated database retrieval system
