Candidatus Nitricoxidivorans perseverans: OHM77_07520
Help
Entry
OHM77_07520 CDS
T09820
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv03420
Nucleotide excision repair
npv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OHM77_07520
03430 Mismatch repair
OHM77_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npv03400
]
OHM77_07520
Enzymes [BR:
npv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OHM77_07520
DNA repair and recombination proteins [BR:
npv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OHM77_07520
MMR (mismatch excision repair)
Other MMR factors
OHM77_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
WIM04559
UniProt:
A0AA49IXC7
LinkDB
All DBs
Position
complement(1463477..1465648)
Genome browser
AA seq
723 aa
AA seq
DB search
MSDLLRGLNPEQLAAVTLPPQHALILAGAGSGKTRVLTTRIAWLLSTGQATPHGILAVTF
TNKAAKEMLARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHRDAGLPQLFQILDSADQLSA
IKRLLKSMNVDDEQYPPREIQHFINARKEQGQRAAAAAMEAWDGHTRKRVEIYEAYEAQC
QKEGVVDFAELLLRAFELLSRNEALRRHYQERFRHILVDEFQDTNVLQYRWLKLLVGDGA
AMFAVGDDDQSIYAFRGAEVGNMRDFEREFKVASVIRLEQNYRSHGNILDAANAIIKNNE
KRLGKNLWTDAGSGEPIRVFEAWSDGEEARWIVEEVRALVRDGHARAEIALLYRSNAQSR
VLEHALFSAGIPYRVYGGLRFFERQEIKHALAYLRLIANPDDDTSFARVVNFPARGIGAR
SVEQLQDAAKAAGGSLFAAIPELTGKAGTSLAAFAGLIVKMKEAAGLPLPELVDHVVELS
GLRDHYRNDKEGQDRLANLDELINAAANFVAEEGRASEEGELSAGLAEFLTHAALEAGEH
QAGEGDDALQLMTVHSAKGLEFNMVFVTGLEEGLFPHEQSANEAKGLEEERRLMYVAVTR
ARQRLYLSFAQTRMLHGQTRYGLPSRFIDEIPAELKKWLTPRAGKAGFAVPQPLTLADAP
PPRAPAAHGAGLFRIGRNVHHAKFGAGVIVNAEGSGTDARVQVNFRHAGMKWLALSVAKL
TAA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccttctccgcgggctcaaccccgaacagcttgccgccgtcacccttccgccg
cagcatgcgctgatcctcgccggggccggctccggcaagacccgcgtgctgaccacccgc
atcgcctggctgctgtcgaccgggcaggccacgcctcacggcatcctcgccgtcaccttc
accaacaaggcggcgaaggagatgctcgcgcggctgtccgccatgctgcccgtcaatgtc
aggggcatgtggatcggcaccttccacggcctgtgcaaccgcctgctgcgcgcgcatcac
cgcgacgccggcctgccgcagcttttccagatactcgattccgccgaccagctctcggcc
atcaagcggctgctgaagtcgatgaacgtggatgacgagcaatacccgccgcgcgagatc
cagcacttcatcaacgcgcgcaaggagcagggccagcgcgcggcggccgcggcaatggag
gcctgggacgggcacacgaggaagcgcgtcgagatttacgaggcctacgaggcgcagtgc
cagaaggagggcgtggtcgacttcgccgagctgctgctgcgcgccttcgagctgctctcc
cgcaacgaggccctgcgccgccactaccaggaacgcttccggcacatcctcgtcgacgag
ttccaggatacgaacgtactgcaataccgctggctcaagctgctcgtcggagacggcgcg
gcaatgttcgcggtcggcgacgacgaccagagcatctacgccttccgcggcgcggaggtc
ggcaacatgcgcgacttcgagcgcgagtttaaggttgccagcgtgatccgcctggagcag
aactaccgctcgcacggcaacatcctcgacgccgccaacgccatcatcaagaacaacgag
aagcgcctgggcaagaacctatggacggacgccggcagcggggagccgatccgcgtgttc
gaggcctggtcggacggcgaggaggcgcgctggatcgtcgaggaggtgcgcgcgcttgtc
cgcgacggccatgcccgcgccgagatcgcgctgctctatcgcagcaacgcgcagtcgcgg
gtgctcgaacatgcgctgttctccgccggcatcccctaccgcgtctatggcggcctgcgg
ttcttcgagcgccaggagatcaagcacgcgctcgcctacctgcgcctgatcgccaatccg
gacgacgatacctcattcgcgcgcgtcgtcaatttcccggcgcgagggataggggcccgc
agcgtcgagcagttgcaggatgccgcgaaggcggccggcggcagcctgttcgcggccatt
ccggaattgaccggcaaggccgggacgtcgctggccgcctttgccgggctgatcgtgaaa
atgaaggaagcggccggccttccgctgcccgagcttgtcgaccacgtcgtcgagctttcc
ggcctgcgcgaccactaccgcaacgacaaggagggccaggaccggctcgccaacctcgac
gagctcatcaacgccgccgccaacttcgtcgccgaggaaggccgggcaagcgaggaaggc
gagctgtccgccggcctcgccgagtttttgacccacgccgcgctcgaagccggcgagcac
caggccggcgagggcgacgacgcgctccagctcatgacggtgcattccgccaaggggctg
gagttcaacatggtcttcgtcaccgggctggaggaggggttgttcccgcacgagcagtcg
gccaacgaagcgaaggggctggaggaggagcgccggctcatgtatgtcgccgtcacccgc
gcccgacagcggctgtacctctccttcgcccagacccgcatgctgcacggccagacgcgc
tacggcctgccttcgcgcttcatcgacgagattccggcggagctgaagaagtggctgacg
ccaagggccggcaaggcgggattcgccgttccgcagccgctgactcttgccgacgcaccg
ccgccgcgcgcgcccgccgcgcacggcgccggattattccgcatcggccggaatgtgcat
cacgccaagttcggcgccggcgtcatcgtcaacgccgaaggctcgggaaccgacgcccgc
gtccaggtgaacttccggcacgccggcatgaagtggctggcgctgtcggtggcgaagctc
acggccgcgtga
DBGET
integrated database retrieval system
