Candidatus Nitricoxidivorans perseverans: OHM77_11375
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Entry
OHM77_11375 CDS
T09820
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv00300
Lysine biosynthesis
npv00470
D-Amino acid metabolism
npv01100
Metabolic pathways
npv01110
Biosynthesis of secondary metabolites
npv01120
Microbial metabolism in diverse environments
npv01230
Biosynthesis of amino acids
Module
npv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OHM77_11375 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OHM77_11375 (dapF)
Enzymes [BR:
npv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OHM77_11375 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WIM05281
UniProt:
A0AA49IYB0
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All DBs
Position
2218368..2219225
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AA seq
285 aa
AA seq
DB search
MKIRFTKMHGLGNDFVVLDAIHQPFVPTRQQARFLADRHFGIGCDQILVVEKPGRPDADF
RYRIFNADGGEVEQCGNGARCFARFVTDKGLTDRREIPVETKSGLIVLRIEDDGQVTVDM
GAPRFAPADIPFDSPMGKASDAVVQPLDMGEAVIDITAVSMGNPHAVHLVADVDHTPVEI
LGPLIESHPRFPQRTNAGFMQVVDRHAIRLRVYERGAGETLACGTGACAAAVAGIRRGLL
DSPVRVITRGGELTIAWAGMGAPVLMTGPAVSVFEGEVEIPENPQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacgcttcaccaagatgcatggcctgggcaacgacttcgtcgtgctcgacgcc
atccaccagcccttcgtgccgacgaggcagcaggcccgcttcctggccgaccggcatttc
ggcatcggctgcgaccagatcctcgtcgtcgagaaaccgggacggccggacgcggatttc
cgctaccggatattcaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcgcgc
tgcttcgcgcgcttcgtcacggacaaggggctgacggacaggcgcgaaatccccgtcgag
acgaagtccggcctcatcgtcctgcgcatcgaggatgacgggcaggtcaccgtcgatatg
ggcgcgccgcgcttcgcgccggccgacatccccttcgacagcccgatgggcaaggcaagc
gacgccgtcgtccagccgctcgacatgggcgaggccgtcatcgacatcaccgccgtctcc
atgggcaacccccatgcggtgcatctcgtggccgacgttgaccacacgccggtggaaatc
ctcggcccgctgatcgagtcccatccccgtttccctcagcggacgaacgccggcttcatg
caggtcgtcgatcgccacgcgatccggctgcgcgtctatgaacgcggcgccggcgaaacg
ctcgcctgcggcacgggcgcctgcgccgccgccgtggccggcatccggcgcggcctgctg
gattcgccggtgcgggtcatcacccggggcggcgaactgaccatcgcctgggccggcatg
ggcgcgccggtcctgatgaccggccccgccgtttccgttttcgaaggtgaagttgaaatc
ccggagaacccgcaatga
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