Candidatus Nitricoxidivorans perseverans: OHM77_11425
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Entry
OHM77_11425 CDS
T09820
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv00300
Lysine biosynthesis
npv00470
D-Amino acid metabolism
npv01100
Metabolic pathways
npv01110
Biosynthesis of secondary metabolites
npv01120
Microbial metabolism in diverse environments
npv01230
Biosynthesis of amino acids
Module
npv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OHM77_11425 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OHM77_11425 (lysA)
Enzymes [BR:
npv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OHM77_11425 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WIM05289
UniProt:
A0AA49FJN7
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All DBs
Position
complement(2229863..2231080)
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AA seq
405 aa
AA seq
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MTLRVEGVSPAAVAERFGTPCYIYSKAALVAAFDAYRAALAGRDALICYAVKANSNLAIL
NLFARLGAGFDIVSGGELARVLAAGGDPGRVIFSGVGKTRAEMAQALEVGIRCFNVESAS
ELEKLNEVAGAQGARAPVALRVNPDVDAGTHPYISTGLRTSKFGVPYDEALPLYRRAAAL
PHIDVAGIDCHIGSQLLDPAPAAEAAGRVLALADALKAEGIVLKHIDLGGGMGIRYRDED
AAPAVADYLAPILAVVAGRPEKLIVEPGRSLVGNAGWLLTRVETLKHGEGRNFAVVDAAM
NDLMRPALYDAWHDIVNVSPSGAAAHIYDIVGPVCESGDFLGQGRELALEEGDLLAVMSA
GAYGMAMSSNYNSRPRAAEVMVDGDDVRLIRARETVESLYALESA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcgcgtcgaaggggtctcgccggccgccgtcgccgagcgattcggcaccccc
tgctacatctactcgaaggcggcgctcgtcgccgccttcgacgcctatcgtgcggcgctc
gccggccgggacgccctgatctgctacgccgtcaaggccaattcgaacctcgccatcctc
aaccttttcgcccgcctgggcgccggcttcgacatcgtttccggcggcgaactggcccgc
gtgctggcggccggcggcgaccccggccgcgtgatcttctccggcgtcggcaagacgcgc
gccgaaatggcgcaggcgctggaagtcggcatccgctgcttcaacgtcgagtcggcctcg
gagctggagaagttgaacgaggtcgccggggcccagggcgcccgcgcgcccgtcgccctg
cgcgtcaatcccgatgtcgacgccggaacccatccctatatctcgacgggcctccggacc
tcgaagttcggcgtcccttatgacgaggcgctgcccctctaccgccgggccgccgccctg
ccccacatcgacgtcgccggcatcgactgccacatcggctcgcaattgctcgatccggcc
cccgccgccgaggcggccggcagggtgctcgccctggcggacgcgctgaaggccgagggc
atcgttctgaaacacatcgacttgggcggcggcatgggcatccgctaccgcgacgaggac
gcggcacccgctgtcgcagactatctggcgccgatcctggccgtcgtggccggacgcccg
gaaaagctcatcgtcgaacccggccgatcgctggtcggcaacgctggctggctgctcacc
cgcgtcgagaccctcaagcatggcgaagggaggaacttcgccgtggtcgacgccgccatg
aacgacctgatgcgccccgcgctctacgacgcctggcacgacatcgtgaacgtcagtccc
agtggggcggcggcacacatctacgacatcgtcggcccggtctgcgaatccggcgacttt
ctcggccagggccgcgaactggcgctcgaagagggcgacctgctggccgtcatgtcggcc
ggcgcctacggcatggccatgagctcgaactacaacagccggccgcgcgccgccgaggtg
atggtcgacggcgacgatgtccgcctgatccgcgcgcgcgaaaccgtcgagtcgctttac
gcgctggaatccgcatga
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