Candidatus Nitrosymbiomonas proteolyticus: NPRO_01370
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Entry
NPRO_01370 CDS
T07108
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy03030
DNA replication
npy03430
Mismatch repair
npy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPRO_01370
03430 Mismatch repair
NPRO_01370
03440 Homologous recombination
NPRO_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npy03032
]
NPRO_01370
03400 DNA repair and recombination proteins [BR:
npy03400
]
NPRO_01370
Enzymes [BR:
npy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPRO_01370
DNA replication proteins [BR:
npy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NPRO_01370
DNA repair and recombination proteins [BR:
npy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NPRO_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBO22542
UniProt:
A0A809RS64
LinkDB
All DBs
Position
complement(152781..156278)
Genome browser
AA seq
1165 aa
AA seq
DB search
MRTLLMSQRFVHLHNHTEFSLLDGANRIPAMVGRAKELGMDSLAITDHGVMFGVMEFYWA
CKDAGIKPLIGMEAYVAPNGHKKRSGREDNDRAHLLLLAKNLEGYRNLCKLATVAALEGF
YSKPRIDHELLRQYGAGLIGTSTCLSSEICRALLRDDYVQANYLAGMYKEIFGEGNYFIE
LQDHRLDQQERIRPQLLRLSKELDIPLVATNDAHYLCKTDHDSHELLLCIQTNDVLSNSK
RMKFNTREFYLKSQEEMEALFADVPEAIGNTGYVADMCEVELASNRAGMPLPELPEGETP
GSYLRKLATESLPGRVQECDEAAWERLKFELDVIENTGFESYFLLVREFANYAREQGIHY
GVRGSAAGSLVSYAIGITEVDPLHYDLTFERFLNPERVSMPDIDMDFEDARREEMIQYVT
SKYGSERVAQIVTFGTMGAKAAIRDTSRVLGKPPQEADRICKCIPNTPGITLERALEEIA
EFKQLVASDPEVREIVEKAKSVEGRIRHCGVHAAGLVISGEPLVEYVPLYRGNEGQPITA
FEMGVLEKMGLLKMDFLGLSNLTVLAQTVRIVAETRGEHLDIGSIPLDDEATFEMLGRGD
TTGVFQLESPGMRRHIQELKPRNVKELSAMVALFRPGPIKHIPEYIDAKYGRKKPEFLDD
RMQPILEETYGVIVYQDQVLKSVRAVAGFTLGKADLLRKAMSKKDKSALDALLEDFLKGC
AANGVEQRVAKRIWTRLEPFAGYAFNKAHAVCYAILAYQTAYLKAHYAVEYMAALLGAYM
EKEDRVITLIDECRRQRIPVLQPSINRSGISFGVEGSAIRFGLAAIKGVGTGMVSSLIEE
RAANGPFRHLYEAAERLKPMGATKPVLEALIKAGALDEFGQNRLTLLGYVDGAISFADSA
NRDRNAGQVSLFGEGEQVADVVHYPELPEAEPPDRAQLTSMEKEVLGVYVSDHPLRGYER
LLPQMSTHRCGAITELDDGTPVRMAGVVSNVRTLVTKRTGEKMASFRLEDFSGQVGVIVF
AKTFAKLGVQVENDTVVQVEGAVMHRERRNGGEKDIEVRLDQLQRLDPPLDLDLASPDSM
AGTVVIQISRATEADLKRLSKLLADHPGDYGLRLDVLVGKQVVPIFPALTVDPQDGLLRR
IPKAVPGAEVTVMSADESKALAHRT
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcacccttctcatgtcccagagattcgtccatttgcacaaccatacggagttcagt
ctcctcgacggagcgaaccggattccggcgatggtcgggcgcgccaaggaactggggatg
gacagtttggcgatcaccgatcacggcgtgatgttcggcgtgatggagttctattgggcg
tgcaaggatgccgggatcaagccgctgatcgggatggaggcgtatgtcgctcccaacggc
cacaagaagcgttcgggaagggaagacaacgaccgcgcccacctcctgttgttggccaag
aaccttgagggctaccgaaatctctgcaagctggcgacggtcgctgcgctcgagggcttt
tattccaagccgcggatcgatcatgagttgttgcggcagtatggcgcgggtctgatcggc
acgagcacgtgcctcagcagcgagatttgtcgggcgctacttcgggatgattatgtacaa
gcgaattacctcgctggcatgtacaaagagatatttggagagggcaactacttcatcgag
ctgcaagaccaccgcctcgaccagcaggagcgcattcggccccagctcctgcgactctcg
aaggaactcgacattcctctggtcgccaccaacgacgcgcactacctgtgtaagacggac
cacgactcgcacgaacttctgctttgcatccagacaaacgacgttttgtcaaatagcaag
cgcatgaagttcaacacaagagagttctatctgaaatctcaggaagagatggaggccctc
tttgcagacgtgcctgaggcgattgggaacacgggatatgtggcggacatgtgcgaagtc
gagctcgcgtccaaccgggcggggatgccgcttccggagttgccggaaggtgagactcca
gggtcgtacttgaggaagctcgcaacggagtctctgcccggtcgcgtccaagagtgcgat
gaagcggcttgggagaggctcaagttcgagctcgacgtgatcgagaacacgggttttgag
tcgtacttcttgctcgtgcgggagtttgcgaactacgcgcgcgagcagggcatccactat
ggggtgcggggctctgcagcgggctccctcgtttcctatgcgatcggaattacggaggtc
gatcctctccactacgacctcacttttgagaggtttctgaatccggagcgagtgtcgatg
cccgacatcgacatggacttcgaggacgcccgacgcgaggagatgattcagtacgttacc
agcaagtacgggtccgaacgggttgcacaaatcgtgacttttgggaccatgggcgccaag
gctgcgattcgtgacacgtcgagggtccttggtaagccgccccaagaggccgacaggatc
tgcaagtgcattccgaacacgccgggaatcacgttggaaagggcgctcgaagaaatcgcc
gagttcaagcaacttgtggcctctgatccggaagtgcgcgagatcgtcgaaaaagctaag
tctgtcgaggggcgaattagacactgtggagtccacgcagccgggctcgtgattagcggc
gaaccgctggtcgaatatgtcccgctgtaccgcggcaacgagggccagcccatcacggcg
ttcgagatgggcgttttggagaagatgggcctcctgaagatggactttttgggcctctcc
aacctcacggtgctcgctcagaccgtccgaatcgtcgccgaaactcgcggagagcatctc
gacatcggcagcatccccttagacgacgaagccacgtttgagatgctgggtagaggcgac
acgacgggagtcttccaactcgagtctcccggaatgaggcgtcacattcaggaacttaag
ccgcgcaatgtgaaggagctatccgcgatggtcgctttgtttcgacctggacccatcaaa
cacattccggaatacatcgatgcaaagtacggtcgcaagaagccggagttcctagacgat
cgcatgcagcccattctggaagagacttacggggtgatcgtctatcaagatcaggtgcta
aagtcggttcgggctgtggctggcttcacccttggaaaggccgacctcttgcgcaaagcg
atgagcaagaaggacaagagtgctctcgacgctttgctcgaggatttcctcaagggatgc
gcggccaacggcgtggagcaaagggttgcgaagaggatttggacccggcttgaacctttt
gcgggctacgcatttaacaaggcgcatgcggtgtgctatgcgatcttggcttatcaaacg
gcctatttgaaggcgcactatgctgtagagtacatggctgccctcttgggggcctacatg
gaaaaggaggatcgggtcataacgctgatcgatgagtgccggaggcaaagaatccctgtg
ctgcagcccagcatcaatcggtcggggattagcttcggtgtggaaggatcggcaatccgg
tttgggttggcggcgatcaagggcgtcggaacgggaatggtgtcgtcgctcatcgaggag
cgagcggcgaacggccccttccgacacctctatgaagctgccgaacggctgaagccaatg
ggagcgacgaagcccgtgctcgaggcgttgatcaaggcaggtgcgttggatgagttcggc
caaaatcgcttgacccttttggggtacgtagatggcgccatttcgtttgccgattccgcg
aatcgcgacagaaacgcggggcaagtatcgttgtttggcgagggcgagcaagtcgccgat
gtggttcattacccggagcttcctgaagcggaaccgcctgacagggctcagcttacttcc
atggagaaggaagtgctcggagtttatgtgtccgatcacccgttgcggggttacgaaagg
ctcttgccgcagatgtccacccatcgctgcggcgccattacggaactggacgacggtacg
ccggtgcgtatggctggcgtcgtttccaatgtacggactctagtcacgaagcgaacaggc
gagaaaatggcgtcgtttcgattggaggatttttcgggccaggtgggggtgatcgtgttc
gcaaagactttcgcaaaacttggggtccaagtagagaacgacaccgttgtgcaggtagag
ggcgccgtcatgcaccgcgagcggcgtaacggcggcgagaaggacatcgaggtgaggttg
gatcagcttcaaaggctggaccccccgctcgacttggacttagcgagtccagattcgatg
gcggggaccgtggtgattcagatcagccgtgcgaccgaggccgatctcaagcggctcagt
aaactgctggcagatcatcccggcgactatggtttgcgcctcgacgtgcttgtggggaag
caggttgtgccgatttttccggcattgacagtcgatccccaagatgggctgcttcgcaga
atccccaaggcggtgcccggcgcggaggttaccgtcatgtcggcggacgaatctaaggct
ctggctcaccggacttaa
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integrated database retrieval system
