Candidatus Nitrosymbiomonas proteolyticus: NPRO_02260
Help
Entry
NPRO_02260 CDS
T07108
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NPRO_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npy03021
]
NPRO_02260
03400 DNA repair and recombination proteins [BR:
npy03400
]
NPRO_02260
Enzymes [BR:
npy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NPRO_02260
Transcription machinery [BR:
npy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NPRO_02260
DNA repair and recombination proteins [BR:
npy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NPRO_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBO22631
UniProt:
A0A809S805
LinkDB
All DBs
Position
243025..244014
Genome browser
AA seq
329 aa
AA seq
DB search
MPHITTLELTTESGTFVLEPLERGYGQTIGNALRRVMLSSIQGAAISACKIDKVFHEFAA
IPGAKEDTTQFLLNLKDVAIKLNVDDGPPQEDKTLRLDVKGPGVVTCADIKCPDGVEIMN
PEHYLLTLSEKGSSLSVEMYVGWGNGYVLPEKQDKYKGIIGVLTMGAQYTPVRKVNYVVE
QTRVGMRTDYERLVIEVTTNGAVSPNDAVSQAAHILERCFRMFTDLGNAGFDSDMLLDET
DSPELSNIPDIRIEELEFSQRTFNCLRRAGLLTLRALATATEADLTSIRGFGKKSLIEVR
DKLAENGIELKPSKGGYRAIELMDDEFDD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacatcaccacgctcgaactcacaacagaatcgggaacgttcgttctcgaaccg
ctcgaaagaggatacggccaaacgatcggcaacgccctgcgcagggtgatgctcagttcg
atccagggcgcggccatcagcgcctgcaagatcgacaaggtctttcacgagttcgccgcg
atcccaggcgccaaggaagacacgacgcagttccttctcaacctcaaggacgtcgccatc
aagctcaacgtggacgacggcccgccgcaagaggacaagaccctgcggctcgatgtcaag
ggcccgggagtcgtaacctgcgccgacatcaagtgtcccgacggagtggagatcatgaac
ccggagcactacctgctcacgctttccgaaaagggttcctcgctttcggtcgaaatgtat
gtcggatggggcaacgggtacgtcctccccgaaaagcaagacaagtacaaagggatcatc
ggggtactcacgatgggcgcgcaatacacgcccgttcgcaaggtgaactacgtggtcgag
cagacccgcgtcggaatgcggaccgactatgaaaggctcgtgatcgaagtgaccacgaac
ggagcggtgtccccgaacgacgcagtttctcaggccgcgcacatcctcgaacgttgtttc
cgaatgttcactgacctcggtaacgcggggttcgattcggatatgttgctcgacgagacc
gattcgcccgaactgtcgaacatcccggacatccgaatcgaggaactcgagttcagccag
aggaccttcaactgcttgcggcgggcgggcctcttgacgctccgcgcgctggccaccgcc
accgaagccgacctcaccagcatccgaggtttcggcaagaagtcgctgatcgaagtcaga
gacaagctcgccgaaaacggaatcgaactcaagccctcgaagggcggctatcgcgccatc
gagttgatggacgacgaattcgacgattga
DBGET
integrated database retrieval system
