Candidatus Nitrosymbiomonas proteolyticus: NPRO_03450
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Entry
NPRO_03450 CDS
T07108
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NPRO_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npy03019
]
NPRO_03450
03016 Transfer RNA biogenesis [BR:
npy03016
]
NPRO_03450
Enzymes [BR:
npy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NPRO_03450
Messenger RNA biogenesis [BR:
npy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NPRO_03450
Transfer RNA biogenesis [BR:
npy03016
]
Prokaryotic type
tRNA degradation factors
NPRO_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
BBO22750
UniProt:
A0A809R5A8
LinkDB
All DBs
Position
382808..385291
Genome browser
AA seq
827 aa
AA seq
DB search
MIHTHSFEVGGKTLSIETGRVAKQAGGSVLLGMGETVVLAAATMSAKPREGIDFLPLVCD
YEERKYAIGKIPGGFMKRGGRPSDKAVLTSRLIDRPIRPQFDSGLRHEIQVITLPFALDP
AYPSDVLAICAAGAALTISDIPFNGPIAGVRVGRIGGEFILFPSLEEIEQSDLDLVVAGH
KNAISMVEAGSIEVTEEDMAAALKFGHDAIQLICAGIEEFAKVAGKPKREVDVHRIDPSL
LELLTKECSKEVEAALVNPDKQARESALNDLIDEIVARYQDRFAEEPDKLSQLREAADKV
VKGSVRKLILEKNKRPDGRGLEDIRQLEAVAGILPRVHGSGLFTRGQTQVMTVLTLGLPS
DAQIMDTLDENVDKRYMHFYNFPPYSVGEVRPLRGPGRREVGHGALAERALKPMVPLDDP
EFPYTLHLVSEVLESNGSTSMASVCGSTLALMDGGVPLKAPVAGIAMGLMSDGKTFKVLT
DIQGMEDFCGDMDFKVAGTRNGITALQLDTKLTGIPDKVLADALSQAQRARMQILDVIEA
EIASPRSAMGAHAPRIVTIQINPEKIGALIGPGGATIRKITSQTGSTIDVQQDGRIMIVC
ADEDKLETTISTIKSLTDEIAIGLQFRGKVTRLMGRGAMVEFVAGREGLVPVEQLTAKSI
RRPDDVVSVGDEINVVVHEIDSMGRVNFTALGLKQDLPSLAGNEDVTPPPPGMRGGGGPR
GRGRDDRDRDRGGRSGGRDRYSRGDRYDRGDRNDRGDRNDRGDRNDRNDRGDRNDRERSS
QESDREPRERPSHDEDREPPEVPSSFPKKERSSGDEEGLTTRFRPRR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgatacatacacactccttcgaggttgggggcaagaccctcagcatcgaaacaggccgc
gtggcgaagcaagctggcggctccgtactcctcggcatgggtgaaacggtcgttcttgcg
gctgccaccatgtcggccaagccgcgagagggcatcgactttcttcctctcgtgtgcgac
tacgaagaaagaaagtacgccattggcaagattcccggcgggttcatgaagcgcggcggc
aggccctccgacaaggcggtcctcacgtcgcgattgatcgaccgaccgattcgcccccag
ttcgacagcgggctcaggcacgagattcaagtgatcaccctgccgttcgctctcgacccg
gcctatccgtcggacgtcctcgcgatttgcgcggcgggcgcggcgctgacgatttctgac
atcccgttcaacggcccgatcgcgggcgttcgggtcggcagaatcggcggtgaattcatc
ttgttcccttcgctcgaagagatcgagcagtccgatctggacctggtggtcgccggacat
aagaacgcgatctcgatggtcgaagcggggtcgatcgaagtcaccgaagaggacatggcg
gctgcgctcaagttcggccacgacgcgatccagctaatttgcgccgggatcgaggagttc
gccaaagtcgccggcaagcccaagcgcgaagtcgacgtccatcgcatcgacccgagcctt
ctcgaactcctcaccaaggagtgctcgaaggaagtcgaggcggcgctggtcaacccggac
aagcaggctcgcgagtcggccctcaacgacttgatcgatgagatcgtcgcccgctaccaa
gaccggttcgccgaagagcccgacaagctgtcccagcttcgggaagccgcggacaaagtg
gtcaaaggctccgttcgcaagctcattctcgaaaagaataagcggcctgacgggcgcgga
ctcgaagacattcgacaactcgaagccgtcgccggtattctgccgcgagttcacggatcg
ggccttttcacccggggccaaacgcaggtcatgaccgtcttgacgctcggcctacccagc
gacgcgcaaatcatggacacgctcgacgagaacgtcgacaagcgctacatgcacttctat
aacttcccgccgtattcggtgggcgaagtgcggcctctgcggggtcccggacgacgcgaa
gtcggacacggagctctcgccgaacgcgcgctgaagccgatggttccgctcgacgaccct
gagttcccctacacgctccacttggtgagcgaggttctcgaatcgaacggatcgacgtcg
atggcttcggtgtgcgggtccacccttgcgctcatggacggcggcgtgcccctcaaggcg
cccgtagccggaatcgcaatgggcctgatgtccgacggaaagaccttcaaggtcctgacg
gacattcaggggatggaggacttctgcggcgacatggacttcaaggtcgcaggaacccgc
aacggcatcaccgcgctccagctcgatacgaagctcaccggaatcccggacaaggttctc
gcggacgccctttcgcaggcgcagcgggcgcggatgcaaatcctcgacgtgatcgaagct
gagatcgcaagcccgagatcggcgatgggcgcccatgccccgcgaatcgtgaccatccag
atcaaccccgagaagatcggcgcgctgatcggtcccggtggcgcgacgatccgcaagatc
acctcgcaaaccggttcgacgatcgacgtccagcaggacggcaggatcatgatcgtctgc
gcggacgaggacaaactcgaaaccacgatctccacgatcaagtcgctcaccgacgagatc
gcgatcgggcttcagttccgaggcaaggtgactcgcctgatgggacgcggagccatggtc
gagttcgtcgcgggtcgcgaagggttggttcctgtcgaacaactcaccgccaagagcatt
cgaaggccggacgacgttgtgagcgtcggagatgagatcaacgtggtcgtacacgagatc
gacagcatgggtcgagtgaacttcacggctctgggattgaagcaagacctgccctccctc
gctggaaacgaggatgtgacgcccccacccccaggaatgaggggcggaggaggtccaaga
ggacgcggacgtgacgaccgggaccgcgaccgaggaggacgctccgggggtcgagatcgg
tacagccgaggcgaccggtacgaccgtggagaccggaatgatcggggagaccggaatgat
cgaggcgatcggaatgaccggaacgacaggggtgatcggaacgaccgagaacgctcgagt
caggaaagcgaccgcgaaccccgcgagcgcccgagtcacgacgaagaccgtgagccgccc
gaagtgccctcgtccttccccaagaaggagcggagctctggcgacgaggaaggtctgacc
actcggttccggccgcgaaggtag
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